Co-expression analysis

Gene ID Os03g0856000
Gene name
Homology with ArabidopsisSimilar to At1g06650: 2-oxoglutarate-dependent dioxygenase, putative (HF=8e-7)
Module size 6 genes
NF 0.26
%ile 26.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.85Os03g0856000AK071626.1-2OG-Fe(II) oxygenase domain containing protein8e-7At1g066502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.6079.70.86Os09g0274900AK062419.1-Conserved hypothetical protein1e+0At1g05740unknown proteinO.I.H.G.S.X.
0.4051.10.85Os12g0263000AY453405.1-Glutathione synthetase4e-6At5g27380GSH2 (GLUTATHIONE SYNTHETASE 2)O.I.H.G.S.X.
0.3338.80.87Os08g0549000AK060276.1-Myb, DNA-binding domain containing protein2e+0At4g00200DNA bindingO.I.H.G.S.X.
0.1510.30.85Os02g0543000AK066415.1--1e-1At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.H.G.S.X.
0.105.70.85Os04g0616300CR290000-Protein kinase domain containing protein1e-3At1g56120kinaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
41.099.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.098.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.198.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.998.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2001GO:0006750The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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