Co-expression analysis

Gene ID Os03g0855100
Gene name
Homology with ArabidopsisSimilar to At2g34830: WRKY35 (WRKY DNA-binding protein 35) (HF=2e-23)
Module size 6 genes
NF 0.50
%ile 66.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.87Os03g0855100AK109795.1-DNA-binding WRKY domain containing protein2e-23At2g34830WRKY35 (WRKY DNA-binding protein 35)O.I.H.G.S.X.
0.8094.60.90Os09g0463600AK072780.1-Plant-specific domain of unknown function 3588containing protein3e-5At1g54215proline-rich family proteinO.I.H.G.S.X.
0.6787.20.88Os08g0438100AK107904.1-The start codon is not identified.3e-1At2g23210UDP-glycosyltransferase/ transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.5068.00.90Os01g0637800NM_192243.1-MYB8 protein3e-1At3g27810ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)O.I.H.G.S.X.
0.4355.40.87Os03g0233800AK108855.1-Conserved hypothetical protein3e-1At1g16750-O.I.H.G.S.X.
0.2321.20.86Os03g02594009631.m01481-Leucoanthocyanidin reductase (EC 1.17.1.3)(Leucocyanidin reductase)5e-1At4g24700unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.499.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.599.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.298.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.098.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.198.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.698.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.998.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.798.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006808Any process that modulates the frequency, rate or extent of nitrogen utilization.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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