Co-expression analysis

Gene ID Os03g0823100
Gene name
Homology with ArabidopsisSimilar to At5g59250: sugar transporter family protein (HF=8e-26)
Module size 7 genes
NF 0.36
%ile 40.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.94Os03g0823100AK103844.1-Sugar transporter-like protein8e-26At5g59250sugar transporter family proteinO.I.H.G.S.X.
0.4253.90.94Os02g0515000AK066257.1-Conserved hypothetical protein1e+0At1g50340invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4051.10.93Os04g0488600AK060198.1-Protein of unknown function DUF565 family protein1e-11At5g43050unknown proteinO.I.H.G.S.X.
0.3032.70.94Os01g0259600AK066193.1-Molybdenum cofactor biosynthesis protein domaincontaining protein4e-25At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.2727.50.94Os02g0768600AK059725.1--2e-68At5g09650AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)O.I.H.G.S.X.
0.2727.50.94Os12g0206700AK071313.1-Hypothetical protein4e-1At3g11110zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2727.50.95Os03g0425200AK101293.1-Inosine/uridine-preferring nucleoside hydrolasedomain containing protein5e-14At2g36310URH1 (URIDINE-RIBOHYDROLASE 1)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4458.10.93Os06g0623300AK102436.1-Conserved hypothetical protein6e-1At2g33600cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.4355.40.93Os06g0528600AB098063.1-Spermidine synthase 1 (EC 2.5.1.16) (Putrescineaminopropyltransferase 1) (SPDSY 1)1e-8At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.H.G.S.X.
0.4355.40.95Os03g0134300AK102053.1-ATP phosphoribosyl transferase8e-1At1g09795ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2)O.I.H.G.S.X.
0.4051.10.96Os04g0306800CB626653-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-2At1g47490ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C)O.I.H.G.S.X.
0.3338.80.90Os04g0165700AK102512.1-Cysteine synthase (EC 2.5.1.47) (O-acetylserinesulfhydrylase) (O- acetylserine (Thiol)-lyase) (CSase)(OAS-TL)1e-21At3g61440CYSC1 (CYSTEINE SYNTHASE C1)O.I.H.G.S.X.
0.3338.80.92Os03g0169800AK068278.1-HNH endonuclease domain containing protein8e-6At3g47490HNH endonuclease domain-containing proteinO.I.H.G.S.X.
0.3338.80.93Os03g0432900CB626981-MscS Mechanosensitive ion channel family protein1e-1At2g21330fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.3338.80.95Os08g0483600AK099543.1-Conserved hypothetical protein4e-1At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)O.I.H.G.S.X.
0.3236.30.94Os01g0618800AK068431.1-Peptidase M41 domain containing protein4e-46At5g53170FTSH11 (FtsH protease 11)O.I.H.G.S.X.
0.3134.50.93Os02g0657700AK108493.1-Conserved hypothetical protein6e-1At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3134.50.94Os08g0484500AK070359.1-Phospho-2-dehydro-3-deoxyheptonate aldolase 1,chloroplast precursor (EC 2.5.1.54)(Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHPsynthetase 1) (3-deoxy-D-arabino-heptulosonate7-phosphate synthase 1)4e-37At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeO.I.H.G.S.X.
0.2931.10.92Os01g0869600AK060596.1-TRAM, LAG1 and CLN8 homology domain containingprotein2e+0At5g41450zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2931.10.93Os04g0320100AK068015.1-Coenzyme F420 hydrogenase/dehydrogenase betasubunit, N-terminal domain containing protein7e-48At1g04620coenzyme F420 hydrogenase family / dehydrogenase, beta subunit familyO.I.H.G.S.X.
0.2931.10.95Os07g0185300AK071133.1-Protein of unknown function YGGT family protein5e-1At1g64750ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))O.I.H.G.S.X.
0.2831.10.93Os04g0507800AK111060.1-The start codon is not identified.5e-1At4g24110unknown proteinO.I.H.G.S.X.
0.2727.50.87Os07g0602100AK062687.1-Conserved hypothetical protein5e+0At5g34869unknown proteinO.I.H.G.S.X.
0.2727.50.92Os02g0184200AU069824-Inorganic H+ pyrophosphatase family protein2e-42At1g15690AVP1O.I.H.G.S.X.
0.2625.60.89Os02g0726300AB028132.1-Dof zinc finger protein9e-22At2g37590Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.2524.10.91Os03g0219200AK073785.1-Superoxide dismutase (EC 1.15.1.1)6e+0At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.699.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
28.699.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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