Co-expression analysis

Gene ID Os03g0788100
Gene name
Homology with ArabidopsisSimilar to At2g35910: zinc finger (C3HC4-type RING finger) family protein (HF=2e-6)
Module size 6 genes
NF 0.45
%ile 57.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.86Os03g0788100AK109154.1-RING-H2 protein2e-6At2g35910zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6181.20.86Os09g04313009637.m02277--4e-5At4g38620MYB4O.I.H.G.S.X.
0.4762.30.87Os08g0562300AK063290.1-Zn-finger, C2H2 type domain containing protein7e-4At5g22890zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4660.90.89Os11g0241200AK111322.1-Hypothetical protein3e-1At5g54585unknown proteinO.I.H.G.S.X.
0.3846.90.87Os03g0279700AK111338.1-ZPT2-125e-1At2g37430zinc finger (C2H2 type) family protein (ZAT11)O.I.H.G.S.X.
0.2117.90.86Os04g0628200AK068148.1--4e-1At1g50820unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.499.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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