Co-expression analysis

Gene ID Os03g0784100
Gene name
Homology with ArabidopsisSimilar to At4g29800: PLP8 (PATATIN-LIKE PROTEIN 8) (HF=3e-3)
Module size 6 genes
NF 0.05
%ile 3.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5371.30.90Os03g07841009631.m05600-Patatin family protein3e-3At4g29800PLP8 (PATATIN-LIKE PROTEIN 8)O.I.H.G.S.X.
0.105.70.90Os05g0437800AK106328.1-Conserved hypothetical protein4e-4At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinO.I.H.G.S.X.
0.094.90.91Os05g0410800AK108312.1-Conserved hypothetical protein1e+0At4g32340-O.I.H.G.S.X.
0.031.40.90Os01g01740009629.m00723-Protein HY5 (AtbZIP56)1e-3At5g11260HY5 (ELONGATED HYPOCOTYL 5)O.I.H.G.S.X.
0.031.40.90Os06g0687600CF196060-Uncharacterized plant-specific domain 01627containing protein8e+0At5g06265hyaluronan mediated motility receptor-relatedO.I.H.G.S.X.
0.021.00.91Os11g0294800AK109559.1-Resistance protein candidate (Fragment)5e-2At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.899.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.398.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.297.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0341GO:0006857The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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