Co-expression analysis

Gene ID Os03g0756000
Gene name
Homology with ArabidopsisSimilar to At5g48760: 60S ribosomal protein L13A (RPL13aD) (HF=6e-7)
Module size 16 genes
NF 0.34
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.40.96Os03g0756000AK106078.1-60S ribosomal protein L13a6e-7At5g4876060S ribosomal protein L13A (RPL13aD)O.I.H.G.S.X.
0.4253.90.97Os05g0556900AK058732.1-Ribosomal protein L35A2e-6At1g4188060S ribosomal protein L35a (RPL35aB)O.I.H.G.S.X.
0.3948.30.97Os12g0176800AK069023.1-Eukaryotic translation initiation factor 2 gammasubunit (eIF-2-gamma) (Suppressor of variegation protein3-9). Splice isoform C4e-71At1g04170EIF2 GAMMAO.I.H.G.S.X.
0.3745.00.97Os08g0117300AK059505.1-40S ribosomal protein S134e-23At3g6077040S ribosomal protein S13 (RPS13A)O.I.H.G.S.X.
0.3644.00.97Os07g0184300CB966587-40S ribosomal protein S15 (Fragment)2e-61At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.3541.70.97Os04g0376000AK064842.1-60S ribosomal protein L35-14e-13At5g0261060S ribosomal protein L35 (RPL35D)O.I.H.G.S.X.
0.3440.00.96Os02g0103700AK102186.1-60S ribosomal protein L9 (Gibberellin-regulatedprotein GA)1e-29At1g3312060S ribosomal protein L9 (RPL90B)O.I.H.G.S.X.
0.3338.80.98Os06g0701400AK121229.1-60S acidic ribosomal protein P3 (P1/P2-like) (P3A)1e-1At3g28560-O.I.H.G.S.X.
0.3338.80.98Os02g0699600AK121709.1-60S ribosomal protein L121e-29At5g6067060S ribosomal protein L12 (RPL12C)O.I.H.G.S.X.
0.3236.30.97Os01g0723200AK063794.1-40S ribosomal protein S19-like3e-11At3g0492040S ribosomal protein S24 (RPS24A)O.I.H.G.S.X.
0.3032.70.98Os09g0507800AK061725.1-60S ribosomal protein L7a2e-86At3g6287060S ribosomal protein L7A (RPL7aB)O.I.H.G.S.X.
0.2727.50.97Os01g0231700AK107453.1-60S acidic ribosomal protein P3 (P1/P2-like) (P3A)1e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.2524.10.97Os01g0896800CF330335-60S ribosomal protein L55e+0At5g25340unknown proteinO.I.H.G.S.X.
0.2422.40.97Os02g0534800AK101459.1-40S ribosomal protein S14 (Clone MCH2)3e-67At3g1151040S ribosomal protein S14 (RPS14B)O.I.H.G.S.X.
0.2422.40.98Os01g0205500AK067763.1-60S ribosomal protein L11-2 (L16). Splice isoform21e-109At4g18730RPL16BO.I.H.G.S.X.
0.2321.20.98Os02g0111700AK058280.1-Ribosomal protein L37e family protein7e-3At1g1525060S ribosomal protein L37 (RPL37A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.299.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.998.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0491GO:0006414The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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