Co-expression analysis

Gene ID Os03g0748800
Gene name
Homology with ArabidopsisSimilar to At5g04895: ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid binding (HF=5e-11)
Module size 6 genes
NF 0.58
%ile 78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os03g0748800BX927843-DEIH-box RNA/DNA helicase5e-11At5g04895ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid bindingO.I.H.G.S.X.
0.6787.20.98Os07g0688000AK069836.1-Metallophosphoesterase domain containing protein9e-4At4g24730calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.5573.70.97Os02g0817800AF242298.1-Telomere binding protein-12e-8At3g46590TRFL1 (TRF-LIKE 1)O.I.H.G.S.X.
0.5573.70.97Os03g0308500CB639253-DEAD/DEAH box helicase, N-terminal domaincontaining protein5e-7At2g47330DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.3338.80.98Os07g0227700AK120258.1-Conserved hypothetical protein2e-5At4g13970zinc ion bindingO.I.H.G.S.X.
0.2931.10.98Os10g0104700AK072615.1-Octicosapeptide/Phox/Bem1p domain containingprotein3e-2At2g46640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.398.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM159264Drought stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
10.398.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM159263Drought stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
10.098.0GSM159262Drought stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
5.396.7GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.296.0GSM278855KT95-418-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO
4.095.9GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
3.795.6GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
3.695.5GSM159266Salt stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlingsLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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