Co-expression analysis

Gene ID Os03g0728200
Gene name
Homology with ArabidopsisSimilar to At5g36228: nucleic acid binding / zinc ion binding (HF=1e+0)
Module size 7 genes
NF 0.55
%ile 74.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4253.90.98Os03g0728200CA762474-Protein prenyltransferase domain containingprotein1e+0At5g36228nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.8395.80.98Os07g0634300AK109879.1-Conserved hypothetical protein5e-2At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.6787.20.98Os04g0672700AK102863.1-Protein prenyltransferase domain containingprotein2e+0At5g64130-O.I.H.G.S.X.
0.5676.30.98Os06g06909009634.m04635-Protein prenyltransferase domain containingprotein4e-1At3g16710-O.I.H.G.S.X.
0.5371.30.98Os11g0486000AK106715.1--1e+0At5g53590auxin-responsive family proteinO.I.H.G.S.X.
0.4355.40.98Os10g0572000NM_197842.1-GTP-binding protein, HSR1-related domaincontaining protein6e-1At5g64460-O.I.H.G.S.X.
0.3948.30.98Os01g0937300AK062872.1-Disease resistance protein family protein2e+0At4g12530protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.299.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.098.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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