Co-expression analysis

Gene ID Os03g0713400
Gene name
Homology with ArabidopsisSimilar to At5g37510: EMB1467 (embryo defective 1467) (HF=7e-92)
Module size 6 genes
NF 0.63
%ile 85.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os03g0713400AK058713.1-NADH-ubiquinone oxidoreductase 75 kDa subunit,mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)(Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complexI subunit)7e-92At5g37510EMB1467 (embryo defective 1467)O.I.H.G.S.X.
0.6787.20.98Os03g0390400AB025187.1-Cytochrome c oxidase subunit 6b (OSJNBa0029H02.1protein) (OSJNBa0067K08.22 protein)7e-37At1g22450COX6B (CYTOCHROME C OXIDASE 6B)O.I.H.G.S.X.
0.5978.00.98Os08g0556600AK121358.1-Conserved hypothetical protein2e-8At3g62790NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.5573.70.98Os01g0600000AK121212.1-Copia-like retroelement pol polyprotein2e+0At4g29480mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.4458.10.98Os12g0169700AK103904.1-Ferripyochelin-binding protein-like8e-16At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.4253.90.98Os07g0585800AK105064.1-NADH-ubiquinone oxidoreductase 18 kDa subunit (EC1.6.5.3) (EC 1.6.99.3) (Complex I-18KD) (CI-18KD)(Fragment)7e-9At5g67590FRO1 (FROSTBITE1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.298.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
7.497.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0006123The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV.Link to AmiGO
0.2221GO:0009060The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.Link to AmiGO
0.2001GO:0006120The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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