Co-expression analysis

Gene ID Os03g0707300
Gene name
Homology with ArabidopsisSimilar to At5g23510: unknown protein (HF=5e+0)
Module size 15 genes
NF 0.58
%ile 79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.97Os03g0707300AK066944.1-Conserved hypothetical protein5e+0At5g23510unknown proteinO.I.H.G.S.X.
0.7289.80.97Os07g0511900AK060218.1-Conserved hypothetical protein2e-1At5g20620UBQ4O.I.H.G.S.X.
0.6987.90.97Os06g0247800AK102187.1-Dynamin-like protein (Fragment)2e-30At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)O.I.H.G.S.X.
0.6787.20.98Os03g0395600AK063311.1-Hypothetical protein4e-1At1g30260-O.I.H.G.S.X.
0.6382.70.97Os07g0497000AK100332.1-Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2)2e-48At5g44800CHR4 (CHROMATIN REMODELING 4)O.I.H.G.S.X.
0.5877.00.98Os03g0750800AK061386.1-Transcriptional adaptor ADA2b (AT4g16420/dl4235c)9e-11At4g16420ADA2B (HOMOLOG OF YEAST ADA2 2B)O.I.H.G.S.X.
0.5877.00.98Os09g0281600AK067020.1-SWAP/Surp domain containing protein6e-12At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.5777.00.97Os11g0661400AK063910.1-AAA ATPase, central region domain containingprotein9e-37At1g02890AAA-type ATPase family proteinO.I.H.G.S.X.
0.5676.30.97Os03g0213300AK058608.1-Hypothetical protein7e-1At1g47495unknown proteinO.I.H.G.S.X.
0.5371.30.97Os08g0502800AK105444.1-SWIB/MDM2 domain containing protein2e-5At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.5269.60.97Os01g0585700NM_192531.1-SIT4 phosphatase-associated protein family protein2e-17At1g30470SIT4 phosphatase-associated family proteinO.I.H.G.S.X.
0.5068.00.98Os12g0102400AK103750.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein6e-16At3g45630RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4458.10.97Os01g0744300NM_191171.1-Casein kinase-like protein4e-15At2g25760protein kinase family proteinO.I.H.G.S.X.
0.4458.10.97Os04g0440100AK105415.1-Nonsense-mediated decay UPF3 domain containingprotein2e-9At1g33980Smg-4/UPF3 family proteinO.I.H.G.S.X.
0.4253.90.97Os08g0537800AK059388.1-The start codon is not identified.4e-2At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.198.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.497.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0501GO:0006414The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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