Co-expression analysis

Gene ID Os03g0693700
Gene name
Homology with ArabidopsisSimilar to At3g10080: germin-like protein, putative (HF=8e+0)
Module size 6 genes
NF 0.78
%ile 97.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.94Os03g0693700AK103716.1-Oxalate oxidase 1 (EC 1.2.3.4) (Germin)8e+0At3g10080germin-like protein, putativeO.I.H.G.S.X.
0.8395.80.93Os12g0151000AK107301.1-Purple acid phosphatase2e-1At3g46120PAP19 (PURPLE ACID PHOSPHATASE 19)O.I.H.G.S.X.
0.8094.60.93Os05g0247800AK073843.1-Glycoside hydrolase, family 18 protein2e+0At1g64628CPuORF57 (Conserved peptide upstream open reading frame 57)O.I.H.G.S.X.
0.7391.10.93Os06g0110200AK107973.1-Late embryogenesis abundant (LEA) group 1 familyprotein1e+0At4g11250AGL52O.I.H.G.S.X.
0.7391.10.93Os08g0104400AK064224.1-Conserved hypothetical protein2e-2At3g12960unknown proteinO.I.H.G.S.X.
0.5068.00.90Os07g0213600AK107696.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein3e-1At5g61660glycine-rich proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.499.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.899.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0009790The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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