CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os03g0647600

Gene name
Homology with Arabidopsis Similar to At4g17310: unknown protein (HF=1e+0)

Module size 6 genes

NF 0.21

%ile 19.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.46 60.9 0.80 Os03g0647600 AK106398.1 - Nf-Y-A subunit 1e+0 At4g17310 unknown protein O.I. H.G. S.X.
0.29 31.1 0.85 Os03g0310000 AK060625.1 - Lipolytic enzyme, G-D-S-L family protein 5e-11 At5g18430 GDSL-motif lipase/hydrolase family protein O.I. H.G. S.X.
0.23 21.2 0.87 Os05g0454200 AK101945.1 - Protein of unknown function DUF315 domaincontaining protein 1e-15 At4g38430 ROPGEF1 O.I. H.G. S.X.
0.17 12.6 0.85 Os07g0539400 BI305420 - Glycoside hydrolase, family 17 protein 1e+0 At2g42930 glycosyl hydrolase family protein 17 O.I. H.G. S.X.
0.13 8.2 0.85 Os08g0112900 AK105876.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g71691 GDSL-motif lipase/hydrolase family protein O.I. H.G. S.X.
0.10 5.7 0.85 Os01g0857600 CB965854 - Conserved hypothetical protein 8e-2 At4g17480 palmitoyl protein thioesterase family protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
52.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.4 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.9 98.0 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.5 97.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.8 97.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.8 97.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.7 97.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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