Co-expression analysis

Gene ID Os03g0622400
Gene name
Homology with ArabidopsisSimilar to At5g05370: ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative (HF=4e+0)
Module size 6 genes
NF 0.66
%ile 88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.99Os03g06224009631.m04085-Conserved hypothetical protein4e+0At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.8094.60.98Os06g0275750NM_185804.1--1e-1At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.6079.70.99Os09g02593669637.m00619--6e+0At5g60400unknown proteinO.I.H.G.S.X.
0.5676.30.98Os03g06381009631.m04211--3e+0At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)O.I.H.G.S.X.
0.5573.70.98Os09g04816509637.m02714--3e-1At1g44830AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.5371.30.98Os06g0528000NM_196265.1--1e+0At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
59.399.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.199.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
7.997.6GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
7.697.5GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.897.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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