Co-expression analysis

Gene ID Os03g0609500
Gene name
Homology with ArabidopsisSimilar to At5g67420: LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37) (HF=9e-6)
Module size 6 genes
NF 0.17
%ile 14.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.79Os03g06095009631.m03974-Protein of unknown function DUF260 domaincontaining protein9e-6At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)O.I.H.G.S.X.
0.6079.70.85Os03g03325009631.m02144-60S ribosomal protein L10 (QM protein homolog)6e-1At2g35850unknown proteinO.I.H.G.S.X.
0.5068.00.85Os06g0692600AK110462.1-Protein kinase domain containing protein3e-2At1g72300leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.149.30.86Os08g04629009636.m03626-Protein of unknown function DUF716 family protein5e-1At3g50580unknown proteinO.I.H.G.S.X.
0.116.50.83Os01g0287600AK063062.1-Chitinase (Class II) (EC 3.2.1.14)3e-2At3g54420ATEP3O.I.H.G.S.X.
0.073.70.79Os08g0562300AK063290.1-Zn-finger, C2H2 type domain containing protein7e-4At5g22890zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
62.899.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.298.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM100439Rice Azucena 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
9.397.9GSM100443Rice Bala 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
8.697.8GSM100440Rice Azucena 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
5.596.8GSM431925Root- +Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.596.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.296.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM100444Rice Bala 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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