Co-expression analysis

Gene ID Os03g0594900
Gene name
Homology with ArabidopsisSimilar to At5g46030: unknown protein (HF=4e+0)
Module size 19 genes
NF 0.58
%ile 79.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8496.00.91Os03g0594900AK069017.1-Cytochrome P450 family protein4e+0At5g46030unknown proteinO.I.H.G.S.X.
0.8295.00.94Os01g0666600CF325024-Conserved hypothetical protein5e+0At3g58380meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.8194.80.92Os04g0578200AK073300.1-Conserved hypothetical protein6e-1At3g12977DNA bindingO.I.H.G.S.X.
0.7289.80.92Os09g0553900AK099586.1--2e+0At5g59040COPT3O.I.H.G.S.X.
0.6787.20.93Os03g02282009631.m01196-Conserved hypothetical protein2e-2At2g23790unknown proteinO.I.H.G.S.X.
0.6787.20.94Os10g0560400AK109732.1-CCT domain containing protein1e-2At3g26400EIF4B1O.I.H.G.S.X.
0.6181.20.94Os12g0626400AK063967.1-Squalene/phytoene synthase family protein7e-10At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseO.I.H.G.S.X.
0.6079.70.93Os04g0583000AK065769.1-TPR-like domain containing protein7e-2At4g02380SAG21 (SENESCENCE-ASSOCIATED GENE 21)O.I.H.G.S.X.
0.5877.00.95Os01g0235100CF297014-Conserved hypothetical protein2e+0At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.H.G.S.X.
0.5877.00.96Os05g0582300AK101790.1-Solanesyl diphosphate synthase2e-17At1g17050SPS2 (Solanesyl diphosphate synthase 2)O.I.H.G.S.X.
0.5877.00.95Os08g0432500AK106170.1-ATP-dependent Clp protease adaptor protein ClpSfamily protein3e-2At3g61678unknown proteinO.I.H.G.S.X.
0.5777.00.94Os08g0566600AK066210.1-Conserved hypothetical protein3e-2At2g05620PGR5 (proton gradient regulation 5)O.I.H.G.S.X.
0.5471.90.95Os05g0170900CB679962-Phosphate/phosphoenolpyruvate translocator1e-1At2g30766unknown proteinO.I.H.G.S.X.
0.5269.60.94Os04g0657500AK066638.1-Lipase, class 3 family protein1e+0At3g17100transcription factorO.I.H.G.S.X.
0.5068.00.92Os02g0704300AK058932.1-Hypothetical protein3e-6At5g35970DNA-binding protein, putativeO.I.H.G.S.X.
0.4762.30.93Os06g0704700AK120907.1-Conserved hypothetical protein1e-34At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.3745.00.93Os01g0866400BU667041-Fructose-1,6-bisphosphatase (EC 3.1.3.11)(Fragment)8e-38At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.3644.00.94Os11g0603200AK059060.1-ABCF-type protein1e-19At5g64840ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5)O.I.H.G.S.X.
0.3338.80.94Os04g0657300CB624212-Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1)2e-1At1g68552CPuORF53 (Conserved peptide upstream open reading frame 53)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.898.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.198.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.998.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0691GO:0008299The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.Link to AmiGO
0.0341GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO
0.0131GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage