Co-expression analysis

Gene ID Os03g0413100
Gene name
Homology with ArabidopsisSimilar to At2g03730: ACR5 (HF=6e-3)
Module size 6 genes
NF 0.29
%ile 30.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3644.00.89Os03g0413100AK100182.1-ACR46e-3At2g03730ACR5O.I.H.G.S.X.
0.4253.90.89Os05g0566400AK100389.1-Blast and wounding induced mitogen-activatedprotein kinase2e-36At3g14720ATMPK19O.I.H.G.S.X.
0.2727.50.90Os09g0401300CB641780-ZIM domain containing protein4e-3At1g70700TIFY7O.I.H.G.S.X.
0.2524.10.90Os01g0629400AK102504.1-NLI interacting factor domain containing protein5e-3At5g11860NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.2219.40.90Os03g0274300CB622390-Initiator-binding protein5e-8At3g46590TRFL1 (TRF-LIKE 1)O.I.H.G.S.X.
0.2016.50.90Os08g0110400AK100025.1-Arabidopsis protein of unknown function DUF266family protein1e-9At1g10280unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.597.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
5.897.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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