Co-expression analysis

Gene ID Os03g0401200
Gene name
Homology with ArabidopsisSimilar to At5g53150: heat shock protein binding / unfolded protein binding (HF=6e-3)
Module size 6 genes
NF 0.49
%ile 65.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.96Os03g0401200AK102662.1-Heat shock protein DnaJ family protein6e-3At5g53150heat shock protein binding / unfolded protein bindingO.I.H.G.S.X.
0.6787.20.96Os01g0765300AK101759.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-5At5g04280glycine-rich RNA-binding proteinO.I.H.G.S.X.
0.5068.00.96Os06g0708900AK100402.1-Hypothetical protein3e-10At4g19190zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.4762.30.96Os07g0644300AK066726.1-XPA-binding protein 2 (HCNP protein) (PP3898)2e-18At5g28740transcription-coupled DNA repair protein-relatedO.I.H.G.S.X.
0.3644.00.96Os03g0130800AK058647.1-Bromodomain containing protein2e+0At5g11740AGP15 (ARABINOGALACTAN PROTEIN 15)O.I.H.G.S.X.
0.3032.70.96Os03g0826400AK071472.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein7e-10At3g47120RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.099.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.498.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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