Co-expression analysis

Gene ID Os03g0379100
Gene name
Homology with ArabidopsisSimilar to At1g26850: dehydration-responsive family protein (HF=2e-15)
Module size 35 genes
NF 0.44
%ile 55.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os03g0379100AK119277.1-Putative methyltransferase DUF248 family protein2e-15At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.7591.90.96Os05g0519400AK072976.1-N-ethylmaleimide sensitive factor NSF (Fragment)2e-73At4g04910NSF (N-ethylmaleimide sensitive factor)O.I.H.G.S.X.
0.6887.50.96Os04g0502200AK066572.1-Conserved hypothetical protein1e-7At5g11040-O.I.H.G.S.X.
0.6281.50.97Os03g0825700AK067902.1-Defective in exine formation6e-40At3g09090DEX1 (DEFECTIVE IN EXINE FORMATION 1)O.I.H.G.S.X.
0.5371.30.96Os01g0300600AK058273.1-Intradiol ring-cleavage dioxygenase domaincontaining protein4e-11At3g62360carbohydrate bindingO.I.H.G.S.X.
0.5371.30.97Os03g0216600AK066051.1-Neutral alpha-glucosidase AB precursor (EC3.2.1.84) (Glucosidase II alpha subunit) (Alphaglucosidase 2). Splice isoform 35e-25At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.5168.70.96Os11g0181100AK100605.1-Nonaspanin (TM9SF) family protein2e-70At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.5168.70.96Os11g0174000AK072825.1-Adaptin, N-terminal domain containing protein2e-89At4g31480coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeO.I.H.G.S.X.
0.5168.70.97Os05g0230600AK070398.1-WD40-like domain containing protein1e-7At5g11560catalyticO.I.H.G.S.X.
0.5168.70.96Os01g0600200AU165696-Ser/Thr specific protein phosphatase 2A Bregulatory subunit beta isoform4e-37At1g17720ATB BETAO.I.H.G.S.X.
0.5068.00.97Os05g0310800AK068582.1-Coatomer delta subunit (Delta-coat protein)(Delta-COP)3e-7At5g05010clathrin adaptor complexes medium subunit-relatedO.I.H.G.S.X.
0.4964.40.97Os03g0112400AK063082.1-AP2 adaptor, appendage domain containing protein5e-2At5g22770alpha-ADR (alpha-adaptin)O.I.H.G.S.X.
0.4762.30.96Os10g0476600AK067811.1-Protein phosphatase 2A 62 kDa B'' regulatorysubunit (Protein phosphatase 2A 62 kDa B regulatorysubunit)4e-50At5g28850calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4558.80.96Os06g0143900AK111584.1-Coatomer protein complex, beta prime6e-99At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.4558.80.96Os07g0201100AK100095.1-Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP)2e-37At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.4458.10.96Os02g0122300AK106553.1-Conserved hypothetical protein1e-2At1g66070translation initiation factor-relatedO.I.H.G.S.X.
0.4355.40.96Os05g0587100AK101645.1-Protein phosphatase 2C family protein3e-16At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4253.90.97Os08g0323000AK064573.1-Conserved hypothetical protein5e-5At5g61970signal recognition particle-related / SRP-relatedO.I.H.G.S.X.
0.4253.90.96Os01g0511300AK069825.1-Proteasome component region PCI domain containingprotein2e-13At4g1900626S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.4253.90.96Os04g0433900CB683883-Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2)2e+0At4g16880disease resistance protein-relatedO.I.H.G.S.X.
0.4152.40.97Os02g0537900AK070310.1-Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1)5e-87At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.4152.40.96Os06g0568000AK071892.1-Nonaspanin (TM9SF) family protein4e-107At3g13772endomembrane protein 70, putativeO.I.H.G.S.X.
0.3948.30.97Os03g0810600AK101920.1-Ras small GTPase, Ras type family protein3e-23At5g27540MIRO1 (Miro-related GTP-ase 1)O.I.H.G.S.X.
0.3846.90.96Os08g0156700AK070710.1-VAP272e+0At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.3846.90.96Os03g0214600AK068605.1-26S proteasome subunit-like protein (26Sproteasome subunit RPN9a)4e-18At4g1900626S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.3644.00.97Os01g0626200AK061897.1-AP2 adaptor, appendage domain containing protein1e-53At5g11490adaptin family proteinO.I.H.G.S.X.
0.3541.70.97Os05g0581800AK100204.1-Protein of unknown function DUF1296 family protein2e+0At1g07485unknown proteinO.I.H.G.S.X.
0.3440.00.97Os07g0496000AK111986.1-Nt-rab6 protein9e-68At2g44610RAB6AO.I.H.G.S.X.
0.3440.00.97Os02g0297600AK122023.1-Protein of unknown function DUF707 family protein8e-20At1g67850unknown proteinO.I.H.G.S.X.
0.3440.00.97Os03g0694900AK121157.1-Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNAligase) (ValRS)2e-28At1g14610TWN2 (TWIN 2)O.I.H.G.S.X.
0.3338.80.96Os02g0504500AK102956.1-Ubiquitin-associated domain containing protein9e-13At1g04850ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.3236.30.97Os01g0253100AK067133.1-Pto kinase interactor 16e-12At4g02010protein kinase family proteinO.I.H.G.S.X.
0.3236.30.97Os05g0556100AK065908.1-SDL5A1e-43At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.2524.10.96Os06g0562600AK067114.1-T-complex protein 1, epsilon subunit(TCP-1-epsilon) (CCT-epsilon) (TCP-K36)2e-88At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeO.I.H.G.S.X.
0.2321.20.97Os04g0444600AK064788.1-26S proteasome subunit RPN6a (Fragment)3e-34At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.099.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.199.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0541GO:0006438The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO
0.0482GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0412GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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