Co-expression analysis

Gene ID Os03g0343500
Gene name
Homology with ArabidopsisSimilar to At3g05560: 60S ribosomal protein L22-2 (RPL22B) (HF=2e-24)
Module size 6 genes
NF 0.57
%ile 77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os03g0343500AB117995.1-60S ribosomal protein L22-22e-24At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.
0.6787.20.99Os02g0814700AK121994.1-60S ribosomal protein L17 [Oryza sativa (japonicacultivar-group)]4e-78At1g0448060S ribosomal protein L23 (RPL23A)O.I.H.G.S.X.
0.5777.00.99Os01g0205500AK067763.1-60S ribosomal protein L11-2 (L16). Splice isoform21e-109At4g18730RPL16BO.I.H.G.S.X.
0.4660.90.99Os03g0807800AK064984.1-40S ribosomal protein S22e-16At3g5749040S ribosomal protein S2 (RPS2D)O.I.H.G.S.X.
0.4660.90.99Os02g0591700AK072777.1-Ribosomal protein L6 (Fragment)9e-6At1g7406060S ribosomal protein L6 (RPL6B)O.I.H.G.S.X.
0.4051.10.99Os01g0815800AK058612.1--2e-31At3g53020STV1 (SHORT VALVE1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.898.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.598.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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