Co-expression analysis

Gene ID Os03g0338000
Gene name
Homology with ArabidopsisSimilar to At3g08860: alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative (HF=5e-9)
Module size 6 genes
NF 0.16
%ile 13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.79Os03g0338000AK121399.1-Alanine:glyoxylate aminotransferase-like protein(Fragment)5e-9At3g08860alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putativeO.I.H.G.S.X.
0.5068.00.81Os11g0152500AF159882.1-Phosphatidylethanolamine-binding protein familyprotein1e-16At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)O.I.H.G.S.X.
0.2422.40.84Os05g0399200AK101507.1-Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-)2e-3At3g23600dienelactone hydrolase family proteinO.I.H.G.S.X.
0.1915.10.85Os04g0610900AK120898.1-EDR19e-5At4g24480serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.105.70.84Os04g0359100AK069384.1-Zinc-containing alcohol dehydrogenase superfamilyprotein2e+0At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.052.50.85Os02g0809800AK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
50.099.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.698.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0048510The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.Link to AmiGO
0.1821GO:0006779The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.Link to AmiGO
0.1541GO:0010229The process whose specific outcome is the progression of an inflorescence over time, from its formation to the mature structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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