Co-expression analysis

Gene ID Os03g0337200
Gene name
Homology with ArabidopsisSimilar to At1g28540: unknown protein (HF=1e-1)
Module size 11 genes
NF 0.52
%ile 68.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.96Os03g0337200AK065446.1-Hypothetical protein1e-1At1g28540unknown proteinO.I.H.G.S.X.
0.6181.20.97Os03g0240900AK120108.1-Tubulin/FtsZ, GTPase domain containing protein4e-2At1g19485AT hook motif-containing proteinO.I.H.G.S.X.
0.5777.00.98Os08g0485600AK064883.1-Zn-finger, C2H2 type domain containing protein2e+0At3g60420-O.I.H.G.S.X.
0.5371.30.97Os06g0708100AK102365.1-Esterase/lipase/thioesterase domain containingprotein7e-5At5g15860ATPCME (PRENYLCYSTEINE METHYLESTERASE)O.I.H.G.S.X.
0.5371.30.97Os04g0284500AK119323.1-Hypothetical protein2e+0At2g01540C2 domain-containing proteinO.I.H.G.S.X.
0.5269.60.96Os01g0310800AK064374.1-Pto kinase interactor 14e-7At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5269.60.96Os01g0310500CB676638-Hypothetical protein4e-6At2g30740serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4762.30.97Os10g0493100AK063145.1-Fertility restorer6e+0At5g25240-O.I.H.G.S.X.
0.4458.10.97Os01g0263600AK101040.1-U5 snRNP-associated 102 kDa protein (U5-102 kDaprotein)5e-29At4g03430EMB2770 (EMBRYO DEFECTIVE 2770)O.I.H.G.S.X.
0.4253.90.97Os12g0225300AK121853.1-FAR1 domain containing protein7e-3At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.3338.80.97Os02g0711000AK067559.1-Conserved hypothetical protein3e-1At5g41910RNA polymerase II mediator complex protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.799.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
33.499.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
32.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.596.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1541GO:0000398The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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