Co-expression analysis

Gene ID Os03g0323500
Gene name
Homology with ArabidopsisSimilar to At5g09450: pentatricopeptide (PPR) repeat-containing protein (HF=2e+0)
Module size 21 genes
NF 0.43
%ile 54.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6887.50.89Os03g0323500AK066439.1-Arf GTPase activating protein family protein2e+0At5g09450pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.6382.70.95Os03g0266800AK100780.1-Protein kinase domain containing protein7e-27At1g31420FEI1 (FEI 1)O.I.H.G.S.X.
0.6079.70.93Os04g0683600AK065557.1-Receptor kinase-like protein3e-7At1g63430leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.5676.30.94Os07g0681700AK103213.1-Glycosyl transferase, family 8 protein9e-2At2g38650GAUT7 (GALACTURONOSYLTRANSFERASE 7)O.I.H.G.S.X.
0.5371.30.96Os01g0969100AK070623.1-Conserved hypothetical protein9e-75At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)O.I.H.G.S.X.
0.5068.00.92Os02g0739900CA763386-Arabidopsis thaliana protein of unknown functionDUF813 family protein2e+0At4g03150unknown proteinO.I.H.G.S.X.
0.5068.00.94Os05g0543100AK065138.1-Clathrin adaptor complex, medium chain familyprotein3e-65At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.5068.00.95Os01g0660300AK106457.1-Pyruvate kinase isozyme G, chloroplast precursor(EC 2.7.1.40)8e-50At5g52920PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)O.I.H.G.S.X.
0.5068.00.95Os08g0230200AK069639.1--5e-3At1g16860merozoite surface protein-relatedO.I.H.G.S.X.
0.4964.40.93Os06g0598800AK101377.1-Fatty acid elongase 1-like protein1e-28At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)O.I.H.G.S.X.
0.4762.30.94Os01g0195200AK105501.1-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)3e-10At2g20300ALE2 (Abnormal Leaf Shape 2)O.I.H.G.S.X.
0.4660.90.94Os12g0640900AK066694.1-Myosin II heavy chain-like family protein4e-50At1g24764ATMAP70-2 (microtubule-associated proteins 70-2)O.I.H.G.S.X.
0.3948.30.94Os08g0242900AK103204.1-Conserved hypothetical protein9e-7At5g57410unknown proteinO.I.H.G.S.X.
0.3846.90.94Os05g0119700AK062482.1-Hypothetical protein1e-1At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.3541.70.94Os10g0477100AK067258.1-Ankyrin-like protein5e-43At4g14360dehydration-responsive protein-relatedO.I.H.G.S.X.
0.3440.00.93Os05g0406800AK062566.1-Leucine-rich repeat, plant specific containingprotein2e-2At3g53235unknown proteinO.I.H.G.S.X.
0.3440.00.94Os07g0501800AK102299.1-Hypothetical protein3e-4At1g28340AtRLP4 (Receptor Like Protein 4)O.I.H.G.S.X.
0.3338.80.94Os03g0287700AK058301.1-Hypothetical protein2e+0At2g39820eukaryotic translation initiation factor 6, putative / eIF-6, putativeO.I.H.G.S.X.
0.3032.70.94Os09g0439700AK119953.1-Lung seven transmembrane receptor family protein4e-3At1g72480-O.I.H.G.S.X.
0.2931.10.95Os08g0544500AK071354.1-Conserved hypothetical protein2e-31At2g35110GRL (GNARLED)O.I.H.G.S.X.
0.2016.50.93Os01g0978000CB678991-Uncoupling protein2e-7At3g54110PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.399.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
17.198.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.698.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0131GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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