Co-expression analysis

Gene ID Os03g0309400
Gene name
Homology with ArabidopsisSimilar to At3g17060: pectinesterase family protein (HF=2e-1)
Module size 20 genes
NF 0.58
%ile 78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.95Os03g0309400AY343494.2-Pectinesterase family protein2e-1At3g17060pectinesterase family proteinO.I.H.G.S.X.
0.6987.90.98Os03g03888009631.m02672-Alpha/beta hydrolase family protein3e-2At5g21950hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.6887.50.96Os07g0281200AK121421.1-Conserved hypothetical protein1e+0At5g57345unknown proteinO.I.H.G.S.X.
0.6583.80.97Os09g0297800AK064738.1-Conserved hypothetical protein4e-1At4g28280unknown proteinO.I.H.G.S.X.
0.6281.50.98Os04g0456100AK070866.1-Hypothetical protein6e+0At5g60800heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6181.20.97Os04g0558900AK100861.1-Proteinase inhibitor I9, subtilisin propeptidedomain containing protein6e-3At5g59810SBT5.4O.I.H.G.S.X.
0.6079.70.98Os01g0808400AK112112.1-Calcium-dependent protein kinase (Fragment)2e-8At5g19360CPK34O.I.H.G.S.X.
0.5877.00.98Os02g0559300AK100088.1-Protein kinase domain containing protein1e-4At1g71530protein kinase family proteinO.I.H.G.S.X.
0.5877.00.96Os04g0585900AK064763.1-Protein of unknown function DUF581 family protein2e-6At4g17670senescence-associated protein-relatedO.I.H.G.S.X.
0.5877.00.95Os01g0763800AK069980.1-Protein of unknown function DUF620 family protein2e-4At1g75160unknown proteinO.I.H.G.S.X.
0.5777.00.96Os05g0372900AK072757.1-Conserved hypothetical protein1e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5573.70.96Os01g0789200AK070450.1-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)2e-1At3g07070protein kinase family proteinO.I.H.G.S.X.
0.5573.70.98Os01g0759200AK069231.1-Serine/threonine kinase3e-3At5g10930CIPK5 (CBL-INTERACTING PROTEIN KINASE 5)O.I.H.G.S.X.
0.5168.70.98Os06g06851009634.m04589-COBRA-like protein 10 precursor2e-2At3g42310unknown proteinO.I.H.G.S.X.
0.5168.70.99Os05g0590100AK072823.1-Ubiquitin domain containing protein8e-5At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinO.I.H.G.S.X.
0.5068.00.98Os01g0939100AK070064.1-Calmodulin-stimulated calcium-ATPase2e-16At3g57330ACA11 (autoinhibited Ca2+-ATPase 11)O.I.H.G.S.X.
0.5068.00.99Os04g0101700AK069225.1-Engulfment and cell motility, ELM domaincontaining protein4e-8At1g03620phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.4051.10.99Os06g0144900AK070509.1--9e-1At5g04310pectate lyase family proteinO.I.H.G.S.X.
0.3846.90.98Os02g0800300AK064756.1-Conserved hypothetical protein1e+0At3g44240CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.
0.3032.70.98Os02g0214400AK101009.1-Pectate lyase homolog (EC 4.2.2.2) (Fragment)4e+0At4g13710pectate lyase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.399.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0911GO:0006909The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.Link to AmiGO
0.0431GO:0006725The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.Link to AmiGO
0.0411GO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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