Co-expression analysis

Gene ID Os03g0308500
Gene name
Homology with ArabidopsisSimilar to At2g47330: DEAD/DEAH box helicase, putative (HF=5e-7)
Module size 6 genes
NF 0.59
%ile 80.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.97Os03g0308500CB639253-DEAD/DEAH box helicase, N-terminal domaincontaining protein5e-7At2g47330DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6787.20.97Os01g0912600AK063179.1-Conserved hypothetical protein1e-2At1g28560SRD2 (SHOOT REDIFFERENTIATION DEFECTIVE 2)O.I.H.G.S.X.
0.6787.20.98Os07g0688000AK069836.1-Metallophosphoesterase domain containing protein9e-4At4g24730calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.6181.20.97Os02g0817800AF242298.1-Telomere binding protein-12e-8At3g46590TRFL1 (TRF-LIKE 1)O.I.H.G.S.X.
0.5573.70.98Os03g0748800BX927843-DEIH-box RNA/DNA helicase5e-11At5g04895ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid bindingO.I.H.G.S.X.
0.3032.70.97Os12g0293100AF288216.1-Telomerase reverse transcriptase2e+0At4g22640-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.898.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM159264Drought stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
10.198.0GSM159263Drought stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
10.198.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM159262Drought stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
9.898.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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