Co-expression analysis

Gene ID Os03g0300900
Gene name
Homology with ArabidopsisSimilar to At3g62660: GATL7 (Galacturonosyltransferase-like 7) (HF=5e-9)
Module size 9 genes
NF 0.21
%ile 19.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.90Os03g0300900AK119594.1-Glycosyl transferase, family 8 protein5e-9At3g62660GATL7 (Galacturonosyltransferase-like 7)O.I.H.G.S.X.
0.4355.40.94Os01g0675500AK069674.1-Glycoprotein-specificUDP-glucuronyltransferase-like protein8e-5At1g27600glycosyl transferase family 43 proteinO.I.H.G.S.X.
0.3236.30.94Os12g0104700AK067342.1-Protein of unknown function DUF231 domaincontaining protein6e-5At1g78710unknown proteinO.I.H.G.S.X.
0.2727.50.93Os02g0329800AK070014.1-Protein of unknown function DUF563 family protein3e-1At3g18170transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.2524.10.94Os06g0687900AK066791.1-Glycosyl transferase, family 43 protein1e-1At4g36890IRX14 (irregular xylem 14)O.I.H.G.S.X.
0.2117.90.93Os02g0518100AK103390.1-Protein of unknown function DUF803 family protein5e-21At3g26670-O.I.H.G.S.X.
0.1510.30.91Os06g0126500AK065197.1-Apoptosis regulator Bcl-2 protein, BAG domaincontaining protein1e-2At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1510.30.91Os06g0656500AK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.H.G.S.X.
0.073.70.91Os01g0921300AK119614.1-Exostosin-like family protein2e-7At1g67410exostosin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.198.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.898.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.897.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0671GO:0009987Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.Link to AmiGO
0.0121GO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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