Co-expression analysis

Gene ID Os03g0297700
Gene name
Homology with ArabidopsisSimilar to At5g10310: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.16
%ile 13.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.93Os03g0297700AK120200.1-The start codon is not identified.3e+0At5g10310unknown proteinO.I.H.G.S.X.
0.5068.00.94Os02g0468200AK103767.1-Protein of unknown function DUF652 family protein3e+0At2g34570MEE21 (maternal effect embryo arrest 21)O.I.H.G.S.X.
0.149.30.94Os05g0163100AK071548.1-Nucleic acid binding protein-like6e-1At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.138.20.94Os10g0422300NM_196549.1-TPR-like domain containing protein4e-6At5g26110ATP binding / catalytic/ protein kinaseO.I.H.G.S.X.
0.127.20.94Os04g0663200AK105958.1--7e-1At5g38020S-adenosyl-L-methionine:carboxyl methyltransferase family proteinO.I.H.G.S.X.
0.073.70.94Os01g0918500AK072446.1-Conserved hypothetical protein4e-1At1g09580emp24/gp25L/p24 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.1GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
4.496.2GSM154950Leaf_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
4.396.1GSM159187SAM, biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
4.296.0GSM154949Leaf_tZ-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
3.995.8GSM154955Leaf_tZ-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO
3.895.7GSM154954Leaf_tZ-treatment_120min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
3.895.7GSM154948Leaf_tZ-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
3.695.5GSM159188SAM, biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
3.695.5GSM154956Leaf_tZ-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
3.495.2GSM149412Rice Bala 1ppm Arsenate Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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