| Gene ID | Os03g0281600 |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g07670: calcium-transporting ATPase (HF=1e-63) |
| Module size | 12 genes |
| NF | 0.53 |
| %ile | 71.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.47 | 62.3 | 0.97 | Os03g0281600 | AK070260.1 | - | Ca2+-ATPase | 1e-63 | At1g07670 | calcium-transporting ATPase | O.I. | H.G. | S.X. | |
| 0.70 | 88.4 | 0.98 | Os01g0585700 | NM_192531.1 | - | SIT4 phosphatase-associated protein family protein | 2e-17 | At1g30470 | SIT4 phosphatase-associated family protein | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | 0.97 | Os05g0562400 | AK121237.1 | - | DDT domain containing protein | 2e-7 | At1g28420 | HB-1 (homeobox-1) | O.I. | H.G. | S.X. | |
| 0.58 | 77.0 | 0.98 | Os03g0750800 | AK061386.1 | - | Transcriptional adaptor ADA2b (AT4g16420/dl4235c) | 9e-11 | At4g16420 | ADA2B (HOMOLOG OF YEAST ADA2 2B) | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | 0.97 | Os03g0395600 | AK063311.1 | - | Hypothetical protein | 4e-1 | At1g30260 | - | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | 0.98 | Os12g0102400 | AK103750.1 | - | RNA-binding region RNP-1 (RNA recognition motif)domain containing protein | 6e-16 | At3g45630 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | 0.98 | Os07g0495900 | AK060293.1 | - | Regulator of nonsense transcripts 1 homolog | 1e-6 | At5g47010 | LBA1 (LOW-LEVEL BETA-AMYLASE 1) | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | 0.98 | Os03g0786800 | AK059186.1 | - | The start codon is not identified. | 4e-54 | At5g46210 | CUL4 (CULLIN4) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.98 | Os04g0440100 | AK105415.1 | - | Nonsense-mediated decay UPF3 domain containingprotein | 2e-9 | At1g33980 | Smg-4/UPF3 family protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.98 | Os09g0281600 | AK067020.1 | - | SWAP/Surp domain containing protein | 6e-12 | At3g52120 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | 0.97 | Os03g0427900 | AU078411 | - | U box domain containing protein | 1e-4 | At5g15400 | U-box domain-containing protein | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | 0.97 | Os04g0129500 | AK071986.1 | - | Sec23/Sec24 zinc finger domain containing protein | 7e-31 | At3g07100 | protein transport protein Sec24, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.0 | 98.0 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.5 | 97.9 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.5 | 97.7 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.3 | 97.7 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 7.7 | 97.6 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.6 | 97.5 | GSM377076 | Genomic DNA - 45 day old leaf sample - mutant g6485 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.6 | 97.5 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.5 | 97.5 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.5 | 97.5 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.4 | 97.5 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.125 | 1 | GO:0006816 | The directed movement of calcium (Ca) ions into, out of, within or between cells. |  |
| 0.125 | 1 | GO:0009307 | Any process that protect an organism from invading foreign DNA by methylation of self DNA at specific sequences and nucleolytic cleavage of unmethylated foreign DNA. | |
| 0.080 | 1 | GO:0007049 | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage