Co-expression analysis

Gene ID Os03g0276600
Gene name
Homology with ArabidopsisSimilar to At5g57540: xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (HF=2e-1)
Module size 26 genes
NF 0.32
%ile 35.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7993.60.94Os03g0276600AK066437.1-Hypothetical protein2e-1At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.4355.40.96Os06g0192500AK067746.1-ATP-dependent helicase, DEAH-box family protein1e-6At1g26370RNA helicase, putativeO.I.H.G.S.X.
0.4253.90.94Os02g06684009630.m04338-ab initio prediction with EST support4e-6At1g20370tRNA pseudouridine synthase family proteinO.I.H.G.S.X.
0.4051.10.97Os12g0194800AK101810.1-contains InterPro domain(s): IPR0014063e-19At1g09800tRNA pseudouridine synthase family proteinO.I.H.G.S.X.
0.3745.00.95Os03g0202300AK071317.1-Conserved hypothetical protein 48 family protein5e-8At3g19630radical SAM domain-containing proteinO.I.H.G.S.X.
0.3745.00.95Os02g0598400AK068111.1-Lipovitellin, superhelical domain containingprotein1e-1At3g48470EMB2423 (EMBRYO DEFECTIVE 2423)O.I.H.G.S.X.
0.3745.00.95Os03g0105700AK100031.1-Protein of unknown function DUF296 domaincontaining protein3e+0At5g44570unknown proteinO.I.H.G.S.X.
0.3745.00.96Os04g0112300AK073153.1-Eukaryotic initiation factor 3, gamma subunitfamily protein4e-3At2g45730eukaryotic initiation factor 3 gamma subunit family proteinO.I.H.G.S.X.
0.3644.00.96Os01g0687600NM_192106.1-Conserved hypothetical protein1e-4At3g48120unknown proteinO.I.H.G.S.X.
0.3440.00.95Os06g0310200CB096959-Conserved hypothetical protein1e-10At4g15570MAA3 (MAGATAMA 3)O.I.H.G.S.X.
0.3440.00.95Os11g0206200AK100873.1-Mitochodrial transcription terminationfactor-related family protein1e-2At1g77855unknown proteinO.I.H.G.S.X.
0.3134.50.96Os05g0102300AK106387.1-HAT dimerisation domain containing protein1e+0At4g25150acid phosphatase, putativeO.I.H.G.S.X.
0.3032.70.95Os12g0574900AK102088.1-Hypothetical protein3e-7At2g03667asparagine synthase (glutamine-hydrolyzing)O.I.H.G.S.X.
0.3032.70.95Os01g0948100AK111411.1-ERCC4 domain containing protein2e-2At4g30870MUS81 (MMS AND UV SENSITIVE 81)O.I.H.G.S.X.
0.3032.70.94Os12g0171200AK107402.1-TRNA nucleotidyltransferase (EC 2.7.7.25)7e-5At1g22660tRNA-nucleotidyltransferase, putative / tRNA adenylyltransferase, putativeO.I.H.G.S.X.
0.3032.70.96Os05g0295100AK100239.1-Protein of unknown function DUF1253 domaincontaining protein1e+0At5g46900protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2931.10.95Os01g0500600AK067312.1-Hypothetical protein3e-1At2g40095unknown proteinO.I.H.G.S.X.
0.2931.10.97Os06g0353400AK120298.1-Conserved hypothetical protein2e+0At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.H.G.S.X.
0.2931.10.95Os01g0205100AK121987.1-Antigenic WD protein6e-14At5g45760transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2831.10.95Os09g0364000AK111875.1-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein8e-11At5g56900CwfJ-like family protein / zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.2831.10.95Os04g0548300AK063594.1-ARM repeat fold domain containing protein7e-1At3g25550F-box family proteinO.I.H.G.S.X.
0.2524.10.96Os12g0109900AB036988.1-Double-stranded RNA binding domain containingprotein6e-2At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2524.10.95Os01g0948400AK067368.1-Pyrroline-5-carboxylate reductase (EC 1.5.1.2)(P5CR) (P5C reductase)1e+1At5g14800P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE)O.I.H.G.S.X.
0.1915.10.95Os01g0269900AK068395.1-Actin/actin-like family protein2e-2At3g33520ATARP6O.I.H.G.S.X.
0.1915.10.96Os05g0587400AK063828.1-contains InterPro domain(s): IPR0109892e-7At4g27620unknown proteinO.I.H.G.S.X.
0.1712.60.95Os01g0559200AK102611.1-Hypothetical protein4e-2At2g46140late embryogenesis abundant protein, putative / LEA protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.999.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.898.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0741GO:0000270The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of strands of glycosaminoglycan cross-linked by oligopeptides to form a huge and rigid network.Link to AmiGO
0.0741GO:0030168A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.Link to AmiGO
0.0741GO:0051258The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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