Co-expression analysis

Gene ID Os03g0259300
Gene name
Homology with ArabidopsisSimilar to At1g18260: suppressor of lin-12-like protein-related / sel-1 protein-related (HF=9e-5)
Module size 26 genes
NF 0.31
%ile 33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.40.92Os03g0259300AK109167.1-Sel1-like repeat containing protein9e-5At1g18260suppressor of lin-12-like protein-related / sel-1 protein-relatedO.I.H.G.S.X.
0.6683.90.93Os02g07431009630.m04993-Zn-finger, RING domain containing protein1e-2At5g40250zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5573.70.93Os01g0374900AK067148.1-Zn-finger, RING domain containing protein2e-1At3g09770zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4863.70.96Os08g0517300AK107181.1-Conserved hypothetical protein5e-15At2g27100SE (SERRATE)O.I.H.G.S.X.
0.4355.40.94Os01g0749900AK103588.1-Conserved hypothetical protein3e-13At1g06470phosphate translocator-relatedO.I.H.G.S.X.
0.4253.90.95Os05g0374600AK110774.1-Heat shock protein DnaJ, N-terminal domaincontaining protein3e-1At2g41520DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4051.10.95Os11g0557300AK120782.1-BSD domain containing protein6e-2At4g05070unknown proteinO.I.H.G.S.X.
0.3948.30.94Os03g0265200AK100867.1-Josephin-like protein1e-2At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)O.I.H.G.S.X.
0.3948.30.94Os02g0605500AK067496.1-Zn-finger, TRAF type domain containing protein8e-1At1g24267unknown proteinO.I.H.G.S.X.
0.3846.90.95Os01g0102800AK064456.1-SNF2-related domain containing protein2e-21At2g18760CHR8 (chromatin remodeling 8)O.I.H.G.S.X.
0.3644.00.95Os03g0746600AK069559.1-WD40-like domain containing protein2e-5At5g50230nucleotide bindingO.I.H.G.S.X.
0.3338.80.95Os03g0227500AK063077.1-Hypothetical protein9e-1At5g25340unknown proteinO.I.H.G.S.X.
0.2931.10.95Os12g0143200AK106270.1--2e-1At5g14370-O.I.H.G.S.X.
0.2831.10.93Os02g0245100AK111709.1-Peroxisomal targeting signal type 2 receptor4e-2At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2727.50.94Os03g0681900AK062094.1-Zn-finger, CCHC type domain containing protein1e-2At1g60650glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.
0.2727.50.95Os02g0820600AK066549.1-Conserved hypothetical protein3e+0At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.H.G.S.X.
0.2625.60.94Os03g0843600AK068216.1-DMI1 protein7e-3At5g49960binding / catalyticO.I.H.G.S.X.
0.2625.60.95Os04g0689700AK066225.1-Conserved hypothetical protein7e-1At2g29620unknown proteinO.I.H.G.S.X.
0.2321.20.95Os01g0680700AK120014.1-Conserved hypothetical protein8e-2At4g21720unknown proteinO.I.H.G.S.X.
0.2321.20.94Os01g0168300AK063678.1-Conserved hypothetical protein7e-10At3g56430-O.I.H.G.S.X.
0.2219.40.96Os01g0894000AK121960.1-Metallophosphoesterase domain containing protein9e-8At3g03305calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.2016.50.95Os06g0308900AK069264.1-Zinc finger DHHC domain containing protein 151e-9At3g18620zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.1915.10.94Os12g0409600CB645117--6e+0At5g18300anac088 (Arabidopsis NAC domain containing protein 88)O.I.H.G.S.X.
0.1915.10.94Os05g0524200AK071990.1-Dual specificity protein phosphatase familyprotein3e+0At5g64810WRKY51O.I.H.G.S.X.
0.1813.70.96Os03g0636600AK069223.1--3e+0At4g36900RAP2.10 (related to AP2 10)O.I.H.G.S.X.
0.1611.30.95Os01g0958400AK121241.1-Protein of unknown function UPF0044 family protein2e-2At5g44280RING1A (RING 1A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.898.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0221GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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