Co-expression analysis

Gene ID Os03g0238300
Gene name
Homology with ArabidopsisSimilar to At4g27170: 2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4 (HF=4e+0)
Module size 9 genes
NF 0.26
%ile 25.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4558.80.83Os03g0238300AK059494.1-Endonuclease/exonuclease/phosphatase familyprotein4e+0At4g271702S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4O.I.H.G.S.X.
0.5068.00.88Os05g0555700AK069230.1-Conserved hypothetical protein4e-1At5g23420HMGB6O.I.H.G.S.X.
0.3440.00.87Os04g0452700AK108820.1-Monosaccharide transporter 14e-6At1g34580monosaccharide transporter, putativeO.I.H.G.S.X.
0.2219.40.87Os01g0191900AK109125.1-Blind4e-2At3g27809unknown proteinO.I.H.G.S.X.
0.2117.90.90Os01g0214800AK065001.1-Lipolytic enzyme, G-D-S-L family protein5e-2At1g28590lipase, putativeO.I.H.G.S.X.
0.2117.90.88Os06g0714300AK107043.1-Auxin responsive SAUR protein family protein1e-1At1g21695hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1611.30.90Os01g0824800AK066200.1-Conserved hypothetical protein2e-1At1g71910unknown proteinO.I.H.G.S.X.
0.1510.30.87Os12g0210400AK068774.1-Protein kinase domain containing protein7e-3At5g49780ATP binding / kinase/ protein serine/threonine kinaseO.I.H.G.S.X.
0.1510.30.90Os01g0878800AK070251.1-Extradiol ring-cleavage dioxygenase, class IIIenzyme, subunit B domain containing protein4e-2At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.799.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.099.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.297.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0009734The series of molecular signals generated in response to detection of auxin.Link to AmiGO
0.0441GO:0050896A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.Link to AmiGO
0.0401GO:0008643The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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