CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os03g0233000

Gene name
Homology with Arabidopsis Similar to At5g66650: unknown protein (HF=1e-2)

Module size 9 genes

NF 0.41

%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.63 82.7 0.75 Os03g0233000 AK069495.1 - Protein of unknown function DUF607 family protein 1e-2 At5g66650 unknown protein O.I. H.G. S.X.
0.64 83.4 0.80 Os12g0432600 AK108851.1 - Zn-finger, RING domain containing protein 2e+0 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) O.I. H.G. S.X.
0.61 81.2 0.79 Os10g0370800 AK122082.1 - Exo-1,3-beta-glucanase precursor (EC 3.2.1.58)(Fragment) 6e-1 At2g40340 AP2 domain-containing transcription factor, putative (DRE2B) O.I. H.G. S.X.
0.55 73.7 0.82 Os02g0562600 AK121163.1 - Mlo-related protein family protein 1e-4 At4g02600 MLO1 O.I. H.G. S.X.
0.46 60.9 0.86 Os07g0680400 AK110900.1 - DNA-binding WRKY domain containing protein 1e-3 At2g30250 WRKY25 O.I. H.G. S.X.
0.28 31.1 0.84 Os11g0482200 AK062443.1 - Hypothetical protein 3e-1 At2g34585 unknown protein O.I. H.G. S.X.
0.27 27.5 0.88 Os01g0916100 CB645166 - Conserved hypothetical protein 4e-2 At1g67570 unknown protein O.I. H.G. S.X.
0.24 22.4 0.80 Os01g0750500 AK067516.1 - Protein of unknown function DUF814 domaincontaining protein 2e-16 At5g11500 unknown protein O.I. H.G. S.X.
0.19 15.1 0.82 Os10g0139700 AK067458.1 - Cytochrome P450 family protein 2e-4 At1g64940 CYP89A6 O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.6 98.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.8 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.5 97.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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