| Gene ID | Os03g0231800 |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g37760: SQE3 (squalene epoxidase 3) (HF=1e-18) |
| Module size | 6 genes |
| NF | 0.41 |
| %ile | 50.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | 0.93 | Os03g0231800 | AK065032.1 | - | XF1 protein (Squalene monooxygenase, putative) | 1e-18 | At4g37760 | SQE3 (squalene epoxidase 3) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.93 | Os02g0562700 | AB110167.1 | - | Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61) | 7e-10 | At3g25530 | GLYR1 (GLYOXYLATE REDUCTASE 1) | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.94 | Os03g0191100 | AK070661.1 | - | Mitochondrial substrate carrier family protein | 3e-4 | At5g64970 | mitochondrial substrate carrier family protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.95 | Os06g0133800 | AK105053.1 | - | The start codon is not identified. | 1e-49 | At2g45290 | transketolase, putative | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | 0.95 | Os06g0484600 | AK062871.1 | - | - | 6e+0 | At5g10880 | tRNA synthetase-related / tRNA ligase-related | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | 0.95 | Os09g0535000 | AK069832.1 | - | Triosephosphate isomerase, chloroplast precursor(EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) | 5e-15 | At2g21170 | TIM (TRIOSEPHOSPHATE ISOMERASE) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 27.9 | 99.6 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 6.7 | 97.3 | GSM431926 | Root- +Fe+P biological rep2 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 5.8 | 97.0 | GSM377072 | Genomic DNA - 45 day old leaf sample - mutant d1137 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 5.3 | 96.7 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.6 | 96.3 | GSM431927 | Root- -Fe+P biological rep1 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 4.5 | 96.3 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.5 | 96.3 | GSM431928 | Root- -Fe+P biological rep2 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 4.2 | 96.0 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.2 | 96.0 | GSM431925 | Root- +Fe+P biological rep1 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 4.2 | 96.0 | GSM302916 | endo6D_rep1 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.286 | 1 | GO:0006573 | The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid. |  |
| 0.200 | 1 | GO:0006098 | The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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