Co-expression analysis

Gene ID Os03g0219900
Gene name
Homology with ArabidopsisSimilar to At3g25920: RPL15 (HF=5e-1)
Module size 6 genes
NF 0.75
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os03g0219900AK066527.1-50S ribosomal protein L15, chloroplast precursor(CL15) (Fragment)5e-1At3g25920RPL15O.I.H.G.S.X.
0.8094.60.98Os02g0822600AK060728.1-50S ribosomal protein L9, chloroplast precursor(CL13)2e+0At3g44890RPL9 (RIBOSOMAL PROTEIN L9)O.I.H.G.S.X.
0.6787.20.98Os01g0749200AK104146.1-50S ribosomal protein L131e-20At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.6787.20.98Os03g0704000CR281175-30S ribosomal protein S13, chloroplast precursor(CS13)1e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.
0.6382.70.98Os03g0284400AF095709.1-Ribosomal protein L10-like2e+0At5g43150unknown proteinO.I.H.G.S.X.
0.5777.00.98Os01g0678600AK120629.1-Ribosomal protein S20 family protein1e-1At4g30460glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlingsLink to GEO
5.997.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.396.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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