Co-expression analysis

Gene ID Os03g0198900
Gene name
Homology with ArabidopsisSimilar to At5g57970: methyladenine glycosylase family protein (HF=7e-8)
Module size 7 genes
NF 0.19
%ile 17.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.90.94Os03g0198900AK063273.1-Methyladenine glycosylase family protein7e-8At5g57970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.4051.10.95Os12g0639100AK063391.1-Nodulin-like domain containing protein7e-2At2g34350nodulin-relatedO.I.H.G.S.X.
0.1510.30.95Os02g0141000AK121058.1--6e-3At3g28940avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putativeO.I.H.G.S.X.
0.1510.30.95Os02g0204500CB627779-Agenet domain containing protein1e+0At5g28615-O.I.H.G.S.X.
0.1510.30.95Os05g0524200AK071990.1-Dual specificity protein phosphatase familyprotein3e+0At5g64810WRKY51O.I.H.G.S.X.
0.149.30.95Os06g0101800AK064178.1-No apical meristem (NAM) protein domain containingprotein5e+0At5g08790ATAF2O.I.H.G.S.X.
0.084.20.95Os06g0130000AK064427.1-Tobacco mosaic virus helicase domain-bindingprotein (Fragment)3e-27At2g45500ATP binding / nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
59.099.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.399.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
10.598.1GSM159191Young inflorescence (P1, upto 3 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
7.897.6GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
7.597.5GSM159218Seed (S4, 11 - 20 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
6.697.3GSM159197Inflorescence (P3, 5 - 10 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
6.397.2GSM159189Young inflorescence (P1, upto 3 cm), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
6.297.1GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.997.0GSM159195Inflorescence (P3, 5 - 10 cm), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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