Co-expression analysis

Gene ID Os03g0197200
Gene name
Homology with ArabidopsisSimilar to At3g18830: ATPLT5 (POLYOL TRANSPORTER 5) (HF=1e-5)
Module size 15 genes
NF 0.29
%ile 29.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.78Os03g0197200AK073216.1-Sorbitol transporter1e-5At3g18830ATPLT5 (POLYOL TRANSPORTER 5)O.I.H.G.S.X.
0.4458.10.90Os10g0190500AK070455.1-Protein of unknown function DUF594 family protein3e-1At5g06250transcription factorO.I.H.G.S.X.
0.4051.10.89Os02g0644900AK066709.1-Sodium/potassium/calcium exchanger 4 precursor(Na(+)/K(+)/Ca(2+)- exchange protein 4). Splice isoform 21e-12At2g47600ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER)O.I.H.G.S.X.
0.3745.00.89Os06g0680500AK099745.1-Glutamate receptor 3.1 precursor (Ligand-gated ionchannel 3.1) (AtGLR2)7e-6At1g05200ATGLR3.4O.I.H.G.S.X.
0.3134.50.88Os09g0460300AK071569.1-Esterase/lipase/thioesterase domain containingprotein1e-2At5g06570hydrolaseO.I.H.G.S.X.
0.2831.10.80Os03g0254200CB624264-Amino acid/polyamine transporter II family protein6e-1At4g34340TAF8 (TBP-ASSOCIATED FACTOR 8)O.I.H.G.S.X.
0.2625.60.88Os01g0362100AK065319.1-Esterase/lipase/thioesterase domain containingprotein3e-4At1g54570esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.2524.10.84Os11g0181800AK071972.1-Short-chain dehydrogenase Tic324e-2At1g64590short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2321.20.88Os11g0660000AK066709.1-Sodium/calcium exchanger membrane region domaincontaining protein1e-12At2g47600ATMHX (ARABIDOPSIS THALIANA MAGNESIUM/PROTON EXCHANGER)O.I.H.G.S.X.
0.2219.40.83Os01g0800500AK066643.1-Metallophosphoesterase domain containing protein3e-1At1g13750calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.2117.90.89Os02g0498300AK070515.1-Protein of unknown function DUF803 family protein8e-7At3g23870permease-relatedO.I.H.G.S.X.
0.1611.30.85Os08g0158200AK069480.1-FAD linked oxidase, N-terminal domain containingprotein8e-1At1g06320unknown proteinO.I.H.G.S.X.
0.1611.30.89Os10g0206500CF294964-Conserved hypothetical protein4e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.1510.30.85Os11g0158400AK102797.1-Digalactosyldiacylglycerol synthase 15e-37At3g11670DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1)O.I.H.G.S.X.
0.1510.30.84Os06g0494400AK067594.1-Multi antimicrobial extrusion protein MatE familyprotein1e-3At5g52450MATE efflux protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.798.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0331GO:0006470The process of removing one or more phosphoric residues from a protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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