Co-expression analysis

Gene ID Os03g0191400
Gene name
Homology with ArabidopsisSimilar to At4g39890: AtRABH1c (Arabidopsis Rab GTPase homolog H1c) (HF=3e-21)
Module size 10 genes
NF 0.43
%ile 54.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8295.00.89Os03g01914009631.m00863-Ras GTPase family protein3e-21At4g39890AtRABH1c (Arabidopsis Rab GTPase homolog H1c)O.I.H.G.S.X.
0.5068.00.94Os04g0503600AK068552.1-Protein kinase domain containing protein2e+0At5g58940CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1)O.I.H.G.S.X.
0.4660.90.94Os11g0703400AB117996.1-Snf7 family protein2e-19At2g06530VPS2.1O.I.H.G.S.X.
0.4458.10.94Os04g04519009632.m03567-Protein phosphatase 2C-like domain containingprotein6e-11At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3948.30.92Os02g0690200AK070868.1-Conserved hypothetical protein4e-1At4g31150endonuclease V family proteinO.I.H.G.S.X.
0.3541.70.92Os02g0475300AK120516.1-Membrane attack complexcomponent/perforin/complement C9 family protein5e+0At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)O.I.H.G.S.X.
0.3338.80.92Os02g0166600AK069371.1-Conserved hypothetical protein5e-2At5g39540-O.I.H.G.S.X.
0.3338.80.95Os02g0173800AK069063.1-Eukaryotic protein of unknown function DUF284family protein2e-8At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.
0.2727.50.92Os04g0452000BM422041-Protein phosphatase type 2C2e-10At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2321.20.92Os02g0606800AK073760.1-Isochorismatase hydrolase family protein5e-1At1g69080universal stress protein (USP) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.398.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.098.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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