Co-expression analysis

Gene ID Os03g0185700
Gene name
Homology with ArabidopsisSimilar to At4g31580: SRZ-22 (HF=2e-1)
Module size 6 genes
NF 0.13
%ile 10.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.85Os03g0185700AK108939.1-The start codon is not identified.2e-1At4g31580SRZ-22O.I.H.G.S.X.
0.5068.00.86Os11g0501000AK109615.1-Hypothetical protein9e-1At2g05970F-box family proteinO.I.H.G.S.X.
0.127.20.86Os11g04353009639.m02194--1e+0At2g36817-O.I.H.G.S.X.
0.116.50.85Os07g0101300AK068020.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e-1At3g18520HDA15O.I.H.G.S.X.
0.094.90.85Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.
0.063.00.83Os12g01832009640.m00762-3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)(3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)(DPNPase)3e-2At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.199.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.198.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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