CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os03g0147300

Gene name
Homology with Arabidopsis Similar to At3g02370: unknown protein (HF=2e+0)

Module size 11 genes

NF 0.57

%ile 77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.65 83.8 0.98 Os03g0147300 9631.m00458 - - 2e+0 At3g02370 unknown protein O.I. H.G. S.X.
0.73 91.1 0.98 Os01g0312300 9629.m02003 - - 2e+0 At5g06660 unknown protein O.I. H.G. S.X.
0.64 83.4 0.98 Os12g0196200 9640.m00883 - - 3e+0 At5g06030 self-incompatibility protein-related O.I. H.G. S.X.
0.61 81.2 0.98 Os01g0609132 9629.m04060 - - 2e+0 At1g20450 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10) O.I. H.G. S.X.
0.61 81.2 0.98 Os07g0133200 9635.m00340 - - 9e-1 At1g33860 unknown protein O.I. H.G. S.X.
0.58 77.0 0.99 Os08g0493100 AK121365.1 - Cyclin-like F-box domain containing protein 1e+0 At1g47370 Toll-Interleukin-Resistance (TIR) domain-containing protein O.I. H.G. S.X.
0.56 76.3 0.98 Os05g0146600 9633.m00472 - - 3e+0 At4g31730 GDU1 (GLUTAMINE DUMPER 1) O.I. H.G. S.X.
0.50 68.0 0.99 Os02g0126200 9630.m00240 - - 6e-1 At1g54095 unknown protein O.I. H.G. S.X.
0.47 62.3 0.98 Os06g0677200 9634.m04508 - - 2e-1 At3g56580 zinc finger (C3HC4-type RING finger) family protein O.I. H.G. S.X.
0.45 58.8 0.98 Os08g0360500 9636.m02688 - - 1e+0 At1g62480 vacuolar calcium-binding protein-related O.I. H.G. S.X.
0.37 45.0 0.98 Os04g0441000 9632.m03472 - - 5e-1 At2g02490 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.1 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.6 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.0 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.1 99.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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