Co-expression analysis

Gene ID Os03g0120900
Gene name
Homology with ArabidopsisSimilar to At4g01500: NGA4 (NGATHA4) (HF=4e-18)
Module size 13 genes
NF 0.66
%ile 88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.85Os03g0120900AK106367.1-AP2 domain containing protein RAP2.8 (Fragment)4e-18At4g01500NGA4 (NGATHA4)O.I.H.G.S.X.
0.8696.40.86Os01g0909400AK068178.1-Plant protein of unknown function DUF868 familyprotein1e-5At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)O.I.H.G.S.X.
0.7591.90.88Os03g0108500AK108704.1-Sterol desaturase family protein2e-4At4g22756SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)O.I.H.G.S.X.
0.6987.90.85Os05g0516100AK107721.1-Conserved hypothetical protein3e-1At5g44570unknown proteinO.I.H.G.S.X.
0.6787.20.91Os02g0133900AK107180.1-Eukaryotic protein of unknown function DUF829family protein7e-1At4g24240WRKY7O.I.H.G.S.X.
0.6382.70.94Os04g0557800AB021079.1-Ra5e+0At5g41315GL3 (GLABROUS 3)O.I.H.G.S.X.
0.5877.00.85Os11g0285000AK070534.1-Beta-amyrin synthase3e-17At2g07050CAS1 (cycloartenol synthase 1)O.I.H.G.S.X.
0.5877.00.92Os04g01823009632.m00908-Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein5e+0At1g01900SBTI1.1O.I.H.G.S.X.
0.5877.00.92Os02g0103100AK071040.1-Conserved hypothetical protein3e-1At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.
0.5777.00.93Os03g02594009631.m01481-Leucoanthocyanidin reductase (EC 1.17.1.3)(Leucocyanidin reductase)5e-1At4g24700unknown proteinO.I.H.G.S.X.
0.5676.30.90Os04g0518800AK069293.1--8e-31At2g37210-O.I.H.G.S.X.
0.5573.70.88Os06g0612300AK071104.1-Zn-finger, C2H2 type domain containing protein2e-39At3g20880zinc finger (C2H2 type) protein (WIP4)O.I.H.G.S.X.
0.5371.30.87Os02g0796600AK067973.1-Esterase/lipase/thioesterase domain containingprotein2e-19At4g31020unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.198.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.398.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1331GO:0006808Any process that modulates the frequency, rate or extent of nitrogen utilization.Link to AmiGO
0.1331GO:0009812The chemical reactions and pathways involving flavonoids, a group of water-soluble phenolic derivatives containing a flavan skeleton including flavones, flavonols and flavanoids, and anthocyanins.Link to AmiGO
0.0951GO:0006333The formation or destruction of chromatin structures.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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