Co-expression analysis

Gene ID Os02g0830100
Gene name
Homology with ArabidopsisSimilar to At5g65620: peptidase M3 family protein / thimet oligopeptidase family protein (HF=7e-24)
Module size 6 genes
NF 0.59
%ile 80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.95Os02g0830100AK065077.1-Oligopeptidase A7e-24At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.8094.60.94Os10g0363600AK111523.1-Cyclin-like F-box domain containing protein4e-3At1g22040kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.5068.00.94Os10g0502500AK061824.1-Cytochrome b5 domain containing protein4e-14At3g48890ATMP2O.I.H.G.S.X.
0.5068.00.96Os08g0562700AK066773.1-Aminopeptidase N4e-44At1g63770peptidase M1 family proteinO.I.H.G.S.X.
0.4458.10.95Os06g0728500AK099928.1-Hypothetical protein2e-2At1g70190ribosomal protein L12 family proteinO.I.H.G.S.X.
0.3644.00.96Os02g0773300AK071811.1-Pyridoxal phosphate-dependent deaminase familyprotein3e-12At1g48420D-CDES (D-CYSTEINE DESULFHYDRASE)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7391.10.93Os03g0169900AK063222.1-Conserved hypothetical protein4e-1At5g64850unknown proteinO.I.H.G.S.X.
0.5573.70.93Os08g0536400AK062466.1-Molluscan rhodopsin C-terminal tail family protein4e+0At4g19200proline-rich family proteinO.I.H.G.S.X.
0.4762.30.92Os07g0685000AK119625.1-Zn-finger, Dof type domain containing protein4e-15At5g62430CDF1 (CYCLING DOF FACTOR 1)O.I.H.G.S.X.
0.4458.10.95Os03g0284100AK099526.1-Expressed protein (Pseudo-response regulator 9)(Timing of CAB expression 1-like protein)4e-19At5g02810PRR7 (PSEUDO-RESPONSE REGULATOR 7)O.I.H.G.S.X.
0.4051.10.91Os09g0532400AK067314.1-Response regulator receiver domain containingprotein1e-6At2g46790APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9)O.I.H.G.S.X.
0.4051.10.92Os02g0148400AK072039.1-Pyridoxamine 5'-phosphate oxidase-related domaincontaining protein2e-17At1g51560FMN bindingO.I.H.G.S.X.
0.4051.10.93Os03g0286200AK105065.1-Prephenate dehydratase with ACT region familyprotein1e-2At3g07630ADT2 (arogenate dehydratase 2)O.I.H.G.S.X.
0.3846.90.89Os02g0526000AK071231.1-Conserved hypothetical protein2e-4At5g47900unknown proteinO.I.H.G.S.X.
0.3644.00.89Os04g0566400CB669008-Zn-finger, C2H2 type domain containing protein9e-30At1g14580zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3644.00.90Os06g0191300AK112016.1-MAP kinase kinase3e+0At3g57500unknown proteinO.I.H.G.S.X.
0.3644.00.96Os10g0464400AY332469.1-Riboflavin kinase / FAD synthetase family protein3e-22At4g21470ATFMN/FHY (riboflavin kinase/FMN hydrolase)O.I.H.G.S.X.
0.3541.70.92Os01g0138900AK072417.1-Mandelate racemase/muconate lactonizing enzymefamily protein5e-19At1g34370STOP1 (sensitive to proton rhizotoxicity 1)O.I.H.G.S.X.
0.3541.70.93Os01g0255000AK109484.1-Soluble epoxide hydrolase1e-11At3g05600epoxide hydrolase, putativeO.I.H.G.S.X.
0.3338.80.92Os06g0498400AK058235.1-R15e-26At1g10760SEX1 (STARCH EXCESS 1)O.I.H.G.S.X.
0.3338.80.94Os04g0437600AK061622.1-MAP protein kinase1e-3At1g53570MAP3KAO.I.H.G.S.X.
0.3134.50.91Os08g0366000AY187619.1-Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31)(PEPCase 2) (CP28)1e-72At3g14940ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)O.I.H.G.S.X.
0.2931.10.88Os08g0176100AK067868.1-DNA/pantothenate metabolism flavoprotein,C-terminal domain containing protein1e-2At1g68190zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2931.10.95Os07g0646300AK066044.1-Conserved hypothetical protein9e-1At3g116302-cys peroxiredoxin, chloroplast (BAS1)O.I.H.G.S.X.
0.2727.50.92Os04g0431000AK111961.1-Hypothetical protein2e-1At5g65880unknown proteinO.I.H.G.S.X.
0.2727.50.93Os09g0525300AK066620.1-Cyclin-like F-box domain containing protein2e-1At1g72920disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.2727.50.88Os02g0672100AK120603.1-Zn-finger, C2H2 type domain containing protein7e-24At1g14580zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2524.10.96Os05g0101200AY262026.1-Peroxisomal membrane anchor protein (Pex14p)domain containing protein1e+0At5g61660glycine-rich proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.398.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.297.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0391GO:0006520The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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