Co-expression analysis

Gene ID	Os02g0814800
Gene name
Homology with Arabidopsis	Similar to At5g44000: glutathione S-transferase C-terminal domain-containing protein (HF=5e-8)
Module size	6 genes
NF	0.47
%ile	61.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.9	0.95	Os02g0814800	AK109850.1	-	-	5e-8	At5g44000	glutathione S-transferase C-terminal domain-containing protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.46	60.9	0.95	Os07g0172600	9635.m00711	-	TPR-like domain containing protein	1e+0	At3g56550	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.44	58.1	0.95	Os01g0933600	AK067040.1	-	Conserved hypothetical protein	3e+0	At5g41520	40S ribosomal protein S10 (RPS10B)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.44	58.1	0.95	Os02g0169000	AK101628.1	-	Conserved hypothetical protein	3e-9	At1g56180	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.33	38.8	0.94	Os06g0214900	AK064752.1	-	Pyridine nucleotide-disulphide oxidoreductase,class I family protein	3e-13	At5g08740	NDC1 (NAD(P)H dehydrogenase C1)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	27.5	0.95	Os06g0246101	CB644318	-	-	2e+0	At1g03650	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.3	97.9	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
7.8	97.6	GSM409434	9311_young panicle 2cm, biological rep5	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
5.9	97.0	GSM409429	Nipponbare_young panicle 2cm, biological rep5	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
5.0	96.6	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8	96.5	GSM429985	Rice mutant phoenix (pho) panicle rep 2	GSE17194	Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.6	96.3	GSM377074	Genomic DNA - 45 day old leaf sample - mutant g282	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.3	96.1	GSM409433	9311_young panicle 2cm, biological rep4	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.2	96.0	GSM409430	9311_young panicle 2cm, biological rep1	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.0	95.9	GSM409431	9311_young panicle 2cm, biological rep2	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.9	95.8	GSM377078	Genomic DNA - 45 day old leaf sample - mutant g6603	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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