CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0814000

Gene name
Homology with Arabidopsis Similar to At3g07090: unknown protein (HF=2e-7)

Module size 6 genes

NF 0.18

%ile 15.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.50 68.0 0.88 Os02g0814000 AK060071.1 - Eukaryotic protein of unknown function DUF862family protein 2e-7 At3g07090 unknown protein O.I. H.G. S.X.
0.50 68.0 0.89 Os04g0244800 AK121488.1 - Heavy metal transport/detoxification proteindomain containing protein 5e-10 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) O.I. H.G. S.X.
0.25 24.1 0.89 Os06g0712300 AK058857.1 - Phospholipid/glycerol acyltransferase familyprotein 6e-30 At2g45670 calcineurin B subunit-related O.I. H.G. S.X.
0.19 15.1 0.90 Os04g0623300 CB618007 - Flavin-containing amine oxidase family protein 2e-18 At2g43020 ATPAO2 (Polyamine oxidase 2) O.I. H.G. S.X.
0.09 4.9 0.89 Os08g0478700 AK058489.1 - Brain mitochondrial carrier protein-1 (BMCP-1)(Mitochondrial uncoupling protein 5) (UCP 5) (Solutecarrier family 25, member 14) 3e-1 At4g20420 tapetum-specific protein-related O.I. H.G. S.X.
0.08 4.2 0.89 Os08g0524200 AK058714.1 - Protein of unknown function DUF568 domaincontaining protein 2e-1 At5g47530 auxin-responsive protein, putative O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
55.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.3 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.7 97.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.3 97.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.125 1 GO:0006584 The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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