Co-expression analysis

Gene ID Os02g0780800
Gene name
Homology with ArabidopsisSimilar to At2g34480: 60S ribosomal protein L18A (RPL18aB) (HF=3e-1)
Module size 9 genes
NF 0.36
%ile 40.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.97Os02g07808009630.m05348-Helicase, C-terminal domain containing protein3e-1At2g3448060S ribosomal protein L18A (RPL18aB)O.I.H.G.S.X.
0.5573.70.97Os02g0658400AK120166.1-Remorin, C-terminal region domain containingprotein8e-1At4g17670senescence-associated protein-relatedO.I.H.G.S.X.
0.4253.90.97Os10g0145100AK073677.1-Cyclin-like F-box domain containing protein2e-1At5g64690neurofilament triplet H protein-relatedO.I.H.G.S.X.
0.3644.00.97Os04g06027009632.m04960-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e-2At1g31600oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3236.30.97Os01g0170100BI808778-D111/G-patch domain containing protein9e-1At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.3134.50.97Os01g0528100NM_193162.1-Winged helix DNA-binding domain containing protein1e-1At4g18940cyclic phosphodiesterase, putativeO.I.H.G.S.X.
0.2727.50.98Os10g0487600AK061153.1-Conserved hypothetical protein3e+0At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.2524.10.97Os10g0479200NM_197022.1-Protein prenyltransferase domain containingprotein1e+0At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.H.G.S.X.
0.2422.40.97Os01g0964800AK107433.1--2e-21At5g42140zinc finger protein, putative / regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.199.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.298.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.198.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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