Co-expression analysis

Gene ID Os02g0769750
Gene name
Homology with ArabidopsisSimilar to At1g54960: ANP2 (HF=7e-1)
Module size 11 genes
NF 0.23
%ile 21.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.98Os02g07697509630.m05236--7e-1At1g54960ANP2O.I.H.G.S.X.
0.3440.00.99Os03g02994009631.m01851--2e-1At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)O.I.H.G.S.X.
0.2931.10.99Os07g05436009635.m05023-Strictosidine synthase family protein8e+0At5g54145unknown proteinO.I.H.G.S.X.
0.2219.40.99Os02g04497009630.m02353--8e+0At5g14750ATMYB66 (MYB DOMAIN PROTEIN 66)O.I.H.G.S.X.
0.2117.90.99Os11g04541009639.m02389--6e-1At1g03070glutamate bindingO.I.H.G.S.X.
0.2117.91.00Os03g06531009631.m04352--5e-1At5g47970nitrogen regulation family proteinO.I.H.G.S.X.
0.1915.10.99Os07g01968009635.m00947--3e-1At2g47560zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1813.70.99Os08g0519350NM_194672.1--2e-1At5g47080CKB1O.I.H.G.S.X.
0.1611.30.99Os11g04121029639.m01946--1e+0At1g03490ANAC006 (Arabidopsis NAC domain containing protein 6)O.I.H.G.S.X.
0.1510.30.99Os06g0365200AK069849.1-Conserved hypothetical protein4e-1At5g06790unknown proteinO.I.H.G.S.X.
0.084.20.99Os02g04781009630.m02632--8e-1At5g44316ATP-binding-cassette transporter, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.099.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.398.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.898.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.998.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0611GO:0007186The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.Link to AmiGO
0.0141GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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