Co-expression analysis

Gene ID Os02g0768600
Gene name
Homology with ArabidopsisSimilar to At5g09650: AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6) (HF=2e-68)
Module size 6 genes
NF 0.61
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.95Os02g0768600AK059725.1--2e-68At5g09650AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)O.I.H.G.S.X.
0.7793.10.95Os06g0484600AK062871.1--6e+0At5g10880tRNA synthetase-related / tRNA ligase-relatedO.I.H.G.S.X.
0.7391.10.96Os12g0615400AK104295.1-37 kDa inner envelope membrane protein,chloroplast precursor (E37)2e-23At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.
0.5573.70.96Os01g0963400AK062343.1-The start codon is not identified.9e-11At1g43560Aty2 (Arabidopsis thioredoxin y2)O.I.H.G.S.X.
0.4762.30.95Os02g0634500AK065162.1-ATP-dependent Clp protease, proteolytic subunitClpP (EC 3.4.21.92)2e-3At5g23140NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7)O.I.H.G.S.X.
0.3541.70.95Os09g0535000AK069832.1-Triosephosphate isomerase, chloroplast precursor(EC 5.3.1.1) (TIM) (Triose-phosphate isomerase)5e-15At2g21170TIM (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.198.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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