Co-expression analysis

Gene ID Os02g0765600
Gene name
Homology with ArabidopsisSimilar to At4g15790: unknown protein (HF=1e+1)
Module size 6 genes
NF 0.25
%ile 24.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.65Os02g0765600NM_193986.1-Alpha-amylase precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase) (Isozyme 1B)1e+1At4g15790unknown proteinO.I.H.G.S.X.
0.6787.20.65Os01g0172800CA765179--1e+0At1g28395unknown proteinO.I.H.G.S.X.
0.6382.70.53Os11g0691100AF353091.2-Protein kinase domain containing protein4e-3At3g25490wall-associated kinase, putativeO.I.H.G.S.X.
0.4458.10.78Os02g0765300CF306714-Alpha-amylase precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase) (Isozyme 1B)1e+0At4g00850GIF3 (GRF1-INTERACTING FACTOR 3)O.I.H.G.S.X.
0.4458.10.82Os02g0765400CF306714-Alpha-amylase precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase) (Isozyme 1B)1e+0At4g00850GIF3 (GRF1-INTERACTING FACTOR 3)O.I.H.G.S.X.
0.063.00.53Os04g0107700AK110974.1-Peptidase C1A, papain family protein3e-3At3g19400cysteine proteinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.299.2GSM116399Seedling_IAA treated_rep1GSE5167Rice seedling hormone treatmentLink to GEO
19.999.1GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatmentLink to GEO
16.998.8GSM431928Root- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
15.898.7GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
14.198.5GSM275412Azucena root tip Buckled at the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varietiesLink to GEO
10.598.1GSM116195Seedling_Control_rep1GSE5167Rice seedling hormone treatmentLink to GEO
9.497.9GSM275406Azucena root tip_At the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varietiesLink to GEO
7.597.5GSM302920root_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.697.3GSM304394Stable transgenic rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO
5.396.7GSM275415Azucena root tip_Before the wax layer_Rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varietiesLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006527The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.Link to AmiGO
0.1821GO:0008295The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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