Co-expression analysis

Gene ID Os02g0750100
Gene name
Homology with ArabidopsisSimilar to At1g47265: unknown protein (HF=4e+0)
Module size 7 genes
NF 0.65
%ile 87.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.97Os02g0750100BI809899-H(+)-transporting ATP synthase (EC 3.6.1.34)(Fragment)4e+0At1g47265unknown proteinO.I.H.G.S.X.
0.8094.60.97Os04g0459500AK071685.1-GADPH (383 AA) (Fragment)6e-11At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)O.I.H.G.S.X.
0.7591.90.97Os06g0608700AK064989.1-Fructose-bisphosphate aldolase, class-I familyprotein1e-36At4g26530fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.7189.60.98Os03g0129300CB644543-Glyceraldehyde-3-phosphate dehydrogenase (EC1.2.1.13) (Fragment)2e-29At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.H.G.S.X.
0.5676.30.98Os10g0492300AK120231.1-IAP1001e+0At4g35295homoserine kinase, putative / HSK, putativeO.I.H.G.S.X.
0.5573.70.99Os02g0698000CB652033-Phosphoribulokinase, chloroplast precursor (EC2.7.1.19) (Phosphopentokinase) (PRKASE) (PRK)1e-32At1g32060PRK (PHOSPHORIBULOKINASE)O.I.H.G.S.X.
0.3948.30.98Os05g0496200AK062214.1--1e-73At1g56190phosphoglycerate kinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.397.5GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.097.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.897.0GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
5.196.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.095.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1283GO:0006096The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle.Link to AmiGO
0.0151GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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