CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0738300

Gene name
Homology with Arabidopsis Similar to At4g14695: unknown protein (HF=1e-1)

Module size 18 genes

NF 0.47

%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.67 87.2 0.98 Os02g0738300 AK108113.1 - Conserved hypothetical protein 1e-1 At4g14695 unknown protein O.I. H.G. S.X.
0.63 82.7 0.99 Os01g0213200 NM_188423.1 - - 4e-1 At1g47970 unknown protein O.I. H.G. S.X.
0.62 81.5 0.98 Os03g0597400 AK108626.1 - Conserved hypothetical protein 5e-2 At3g04640 glycine-rich protein O.I. H.G. S.X.
0.59 78.0 0.99 Os07g0510300 9635.m03206 - Conserved hypothetical protein 2e+0 At5g57270 unknown protein O.I. H.G. S.X.
0.57 77.0 0.99 Os08g0404800 9636.m03123 - - 3e+0 At4g24026 unknown protein O.I. H.G. S.X.
0.57 77.0 0.98 Os06g0233100 9634.m01249 - - 3e+0 At5g65000 nucleotide-sugar transporter family protein O.I. H.G. S.X.
0.56 76.3 0.99 Os04g0467300 9632.m03715 - - 2e-1 At2g22000 PROPEP6 (Elicitor peptide 6 precursor) O.I. H.G. S.X.
0.56 76.3 0.99 Os05g0454400 AK107942.1 - Conserved hypothetical protein 2e-1 At1g78410 VQ motif-containing protein O.I. H.G. S.X.
0.53 71.3 0.99 Os01g0609800 NM_192729.1 - - 2e-2 At1g58150 unknown protein O.I. H.G. S.X.
0.53 71.3 0.99 Os10g0208400 NM_195493.1 - - 6e+0 At5g16710 DHAR3 (dehydroascorbate reductase 1) O.I. H.G. S.X.
0.46 60.9 0.99 Os03g0332366 9631.m02141 - - 2e-1 At5g04080 unknown protein O.I. H.G. S.X.
0.43 55.4 0.99 Os04g0464300 AK111143.1 - Conserved hypothetical protein 3e-2 At5g36710 unknown protein O.I. H.G. S.X.
0.39 48.3 0.98 Os12g0299200 9640.m02019 - Hypothetical protein 2e+0 At2g36026 - O.I. H.G. S.X.
0.37 45.0 0.99 Os04g0539200 9632.m04388 - - 3e+0 At5g54850 unknown protein O.I. H.G. S.X.
0.33 38.8 0.98 Os09g0484700 9637.m02754 - - 1e+0 At5g16950 unknown protein O.I. H.G. S.X.
0.33 38.8 0.99 Os01g0288301 NM_183574.1 - - 3e+0 At5g26720 unknown protein O.I. H.G. S.X.
0.32 36.3 0.99 Os10g0345500 NM_195897.1 - - 1e+0 At5g14740 CA2 (CARBONIC ANHYDRASE 2) O.I. H.G. S.X.
0.28 31.1 0.99 Os03g0127200 9631.m00265 - NAM protein 2e-28 At2g18060 VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1) O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
32.8 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.0 99.6 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.0 98.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.4 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.033 1 GO:0006418 The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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