Co-expression analysis

Gene ID Os02g0734600
Gene name
Homology with ArabidopsisSimilar to At4g14640: CAM8 (CALMODULIN 8) (HF=8e-1)
Module size 21 genes
NF 0.19
%ile 17.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.87Os02g0734600AK070347.1-EFA27 for EF hand, abscisic acid, 27kD8e-1At4g14640CAM8 (CALMODULIN 8)O.I.H.G.S.X.
0.4051.10.91Os01g0803200AK121632.1-Cysteine proteinase inhibitor-I (Oryzacystatin-I)1e+0At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.3644.00.93Os08g0292900AK111645.1-Homeodomain transcription factor KNAT73e-9At5g11060KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4)O.I.H.G.S.X.
0.3236.30.90Os03g0142900AK120438.1-Plant protein of unknown function DUF946 familyprotein4e-3At3g04350unknown proteinO.I.H.G.S.X.
0.3236.30.93Os04g0650000AK121500.1-Oryzain alpha chain precursor (EC 3.4.22.-)2e-26At1g47128RD21 (responsive to dehydration 21)O.I.H.G.S.X.
0.3134.50.91Os07g0483500AK064915.1-Phosphoribosylanthranilate transferase-likeprotein1e-13At5g06850C2 domain-containing proteinO.I.H.G.S.X.
0.3032.70.91Os11g0186200BI806335-Aldehyde dehydrogenase (EC 1.2.1.3)1e+0At1g01520myb family transcription factorO.I.H.G.S.X.
0.2117.90.93Os02g0817700AY224469.1-Acetyl-CoA acyltransferase (3-ketoacyl-coathiolase) (EC 2.3.1.16)5e-9At1g04710PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4)O.I.H.G.S.X.
0.2117.90.88Os01g0920100AK069808.1-Conserved hypothetical protein2e+0At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.2016.50.92Os03g0324200AK101076.1-EIL38e-2At5g21120EIL2 (ETHYLENE-INSENSITIVE3-LIKE 2)O.I.H.G.S.X.
0.1915.10.92Os04g0437600AK061622.1-MAP protein kinase1e-3At1g53570MAP3KAO.I.H.G.S.X.
0.1813.70.90Os09g0442300CB666183-Oryzain gamma chain precursor (EC 3.4.22.-)4e-30At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.1712.60.90Os01g0131300AK101998.1-Conserved hypothetical protein2e+0At1g13930-O.I.H.G.S.X.
0.1712.60.93Os05g05337009633.m04288-NADH-ubiquinone oxidoreductase subunit PSST(Fragment)2e-47At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.1510.30.91Os05g0475300AK065069.1-VHS domain containing protein1e-6At5g01760VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.1510.30.91Os02g0821900AK071088.1-Conserved hypothetical protein2e-1At4g00355unknown proteinO.I.H.G.S.X.
0.149.30.89Os03g0788800AK071670.1-Zn-finger, RING domain containing protein4e-15At5g22000RHF2A (RING-H2 GROUP F2A)O.I.H.G.S.X.
0.149.30.92Os08g0179900AK072550.1-Conserved hypothetical protein2e+0At4g01510ARV2O.I.H.G.S.X.
0.116.50.90Os03g0440900AK061730.1-LRR protein9e-3At5g21090leucine-rich repeat protein, putativeO.I.H.G.S.X.
0.116.50.94Os12g0278700AK068027.1-Cystinosin homolog7e-7At5g40670PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.
0.084.20.90Os07g0492000D16292.1-Nucleoside diphosphate kinase I (EC 2.7.4.6) (NDKI) (NDP kinase I) (NDPK I)6e-10At4g09320NDPK1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0801GO:0006120The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I.Link to AmiGO
0.0711GO:0006891The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).Link to AmiGO
0.0181GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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