CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0732800

Gene name
Homology with Arabidopsis Similar to At2g23540: GDSL-motif lipase/hydrolase family protein (HF=2e+0)

Module size 6 genes

NF 0.60

%ile 82.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.71 89.6 0.87 Os02g0732800 9630.m04898 - Lipolytic enzyme, G-D-S-L family protein 2e+0 At2g23540 GDSL-motif lipase/hydrolase family protein O.I. H.G. S.X.
0.77 93.1 0.89 Os07g0668300 AK061122.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At2g23540 GDSL-motif lipase/hydrolase family protein O.I. H.G. S.X.
0.63 82.7 0.88 Os07g0677600 AK060984.1 - Cationic peroxidase 1e-2 At5g39580 peroxidase, putative O.I. H.G. S.X.
0.57 77.0 0.88 Os07g0600200 AK105814.1 - Conserved hypothetical protein 5e+0 At5g55750 hydroxyproline-rich glycoprotein family protein O.I. H.G. S.X.
0.55 73.7 0.88 Os07g0524200 AK108285.1 - Harpin-induced 1 domain containing protein 4e-1 At5g03890 unknown protein O.I. H.G. S.X.
0.33 38.8 0.87 Os06g0274800 NM_185795.1 - Peroxidase 11 precursor (EC 1.11.1.7) (AtperoxP11) (ATP23a/ATP23b) 5e-4 At1g68850 peroxidase, putative O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.7 99.1 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.8 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.0 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1 97.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.9 97.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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